Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1764 ATGGATAGCACCGATTCATCTTCAGGGTGTCAGCATCCTCAGCTTCCTCCCGGATTCCGATTCCATCCCACCGACGAAGAGCTCGTCGTTCACTACCTCAAGCGAAAAGCCGCCTCCGCTCCGCTGCCCGTCGCCATCATCGCCGACGTCGATCTCTACAAGTTCGATCCCTGGGAGCTTCCAAGTAAGGCAGCGTTTGGGGAGCAAGAGTGGTACTTCTTCAGCCCGAGGGATCGCAAGTATCCAAATGGAGCGAGGCCAAACAGGGCAGCCACTTCGGGATATTGGAAAGCTACAGGAACGGACAAGCCGATATTGTCGTCGGACGGACGAAACCAGAAAGTCGGCGTGAAGAAAGCTCTGGTTTTCTACGGAGGGAAGCCTCCAAAAGGCCTTAAAACCAATTGGATCATGCATGAGTATAGGCTCACTGACAACAATTCTTACAATAATAATTCTACCCCTAAGCCTCTTCCTCTGGCTTCTGATCCTGCCTCACAATCCTCCAAGAAGAACTCGTTAAGGCTTGACAATTGGGTTTTGTGTCGAATATACAAGAAAAGCAACAGTAGTATGAGTAATAGTCTGCAAAGGCTGCCATTGATGGAGCAGGAGAGGGAGATTTGTATGGAGGCTATGCTTCCAACCATCTCAAGTTTATCAATGGCCAACCACCAAAACTCCAACCCTCCATTAGGACTTGAGAACGAAGACAACTTGTTCGATGGATTTCTGGGCATCGGTGGCGGCGGCGGCGGCGGAGGAGGAGGAGGAGGAGGTGGTGGTGATTCTCATGATCATCGCTTGCCTGCTGTGAAACGACACCTGCCATCGCCGTTTTGGAACGAGACGACGGTGGGGTCTCCTTCGGGGTCGTCTTCGTCGAGCAAGAGATTCCACGGTGATCTGAACAGCACAGGGATGAGTACTACATCAGCGGAGGAGAACAGTTCGTTCATGTCTCTGCTGAGCCAGCTTCCTGCTCAGAATACAACGACGTTTCTTGGCTCCGTCGGTGACAGTGTTATGAGGCAGCAGTTTCAACTCCCAACAAGCCTGAATTGGACCTCATAA 1074 0.5158 MDSTDSSSGCQHPQLPPGFRFHPTDEELVVHYLKRKAASAPLPVAIIADVDLYKFDPWELPSKAAFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPILSSDGRNQKVGVKKALVFYGGKPPKGLKTNWIMHEYRLTDNNSYNNNSTPKPLPLASDPASQSSKKNSLRLDNWVLCRIYKKSNSSMSNSLQRLPLMEQEREICMEAMLPTISSLSMANHQNSNPPLGLENEDNLFDGFLGIGGGGGGGGGGGGGGGDSHDHRLPAVKRHLPSPFWNETTVGSPSGSSSSSKRFHGDLNSTGMSTTSAEENSSFMSLLSQLPAQNTTTFLGSVGDSVMRQQFQLPTSLNWTS 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1764 357 MobiDBLite consensus disorder prediction 148 170 - -
Lele15g1764 357 Gene3D NAC domain 24 192 IPR036093 GO:0003677|GO:0006355
Lele15g1764 357 MobiDBLite consensus disorder prediction 1 21 - -
Lele15g1764 357 FunFam NAC transcription factor 56 24 192 - -
Lele15g1764 357 SUPERFAMILY NAC domain 9 187 IPR036093 GO:0003677|GO:0006355
Lele15g1764 357 ProSiteProfiles NAC domain profile. 15 187 IPR003441 GO:0003677|GO:0006355
Lele15g1764 357 Pfam No apical meristem (NAM) protein 16 143 IPR003441 GO:0003677|GO:0006355
Lele15g1764 357 MobiDBLite consensus disorder prediction 281 312 - -
Lele15g1764 357 PANTHER NAC TRANSCRIPTION FACTOR 56 15 216 - -
Lele15g1764 357 MobiDBLite consensus disorder prediction 278 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1764 Lele-ChrLele15 10643905 10645165 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1764 5 357 NAC Transcription Factor Family AT1G61110 53.134 1.91e-106 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele15g1764 NAM 5.4e-40 No_clan