Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1749 ATGGCAGCGGAGACGCTCCCTTACGATAACGGCGTCGTTGCCAATGGAGATCTGAGCGCCACCTCCAACTCCACCGCCGCCGCCAAGAAGTCGCGGGAGAGCGAGCGCCGTCGTCGCCGCCGGAAGCAGAAGAAGAACAAGGCCTCGCAGGAGTCTGAATCTAATGCCGCTGAAGATGGTGAGGCGGCAGATATAGCCGATGATAACGCGAAGGAGAATAAGGATCCTCAACAGGCGGTTGAAAATGTTGAAGTTGAATATGTTCCTGAGAAGGCAGAGCTCGATGAAGGTTTAGATGAAGAATTTAGAAAAATCTTTGAGAAGTTTAGTTTCACTGATGTTACTAGCACTGAGGATACTGATAAGAAGGACGAGTCAGCAGAAAATGCTGCTGCTACTAAGAAGGCTGATTCTGATTCTGAAGAGGAAGAAAATGATAATGAGCAAAAAGAGAAAGGCATCTCAAACAAGAAGAAAAAGCTTCAACGGCGGATGAAGATTGCTGAATTAAAACAAATTTGCTTAAGGCCTGATGTTGTTGAGGTGTGGGATGCTACTGCAGCAGATCCAAAGTTGCTGGTGTTCTTAAAATCATATCGAAATACTGTTCCTGTACCAAGGCATTGGTGTCAGAAGAGGAAATTTTTGCAGGGAAAACGAGGTATTGAGAAACAACCTTTTCAGCTTCCTGATTTTATTGCTGCCACAGGAATTGAGAAAATCAGACAGGCTTACATTGAGAAAGAGGACAGTAAGAAGTTGAAGCAAAAGCAGAGGGAGCGTATGCAACCAAAAATGGGGAAAATGGATATCGACTACCAGGTTCTTCATGATGCGTTCTTTAAATATCAGACAAAGCCAAAGCTGACAAGCCTAGGGGACCTGTACCATGAGGGAAAAGAATTTGAGGTAAAGTTGAGGGAGATGAAACCTGGCCTTTTGTCCTATGATCTTAAGGAGGCTCTTGGTATGCCTGAGGGTGCTCCACCTCCATGGCTTATTAATATGCAGAGATATGGTCCTCCACCATCGTACCCTCATCTTAAAATCCCTGGGTTGAATGCTCCTATTCCTCCTGGAGCTAGTTTTGGTTATCATCCTGGTGGATGGGGCAAGCCTCCTGTTGATGAATATGGGCGTCCTCTCTATGGAGATGTATTCGGTGTTCTTCAACAAGAACAACCTAACTACGAGGAGGAACCTGTTGATAAGACCAAACACTGGGGTGACTTGGAGGAGGAGGAGGAAGAGGAAGAGGAGGAGGAGGAGGAGGAAGAGGAGGAGGAACAGGAAATGGAGGAGGAGGAACTTCAGGATGGTATTCAATCTGTTGATAGTCTTTCAAGCACTCCCACTGGAGTGGAGACGCCTGATTTTATTGACCTTCGTAAGCAGCAGAGGAAGGACTCTGAGAGACCTCTTTATGAAGTACTTGAAGAGAAGGAAGAAAGAATTGCTCCAGGAACTTTACTTGGAACCACCCACACGTATGTGGTCAATACTGGCGCCCAGGACAAGCCAGGTGCTAAAAGGGTTGATTTGCTTAGGGGTCAGAAGTCGGATAAGGTGGATGTTACTTTACAGCCAGAAGAGTTGGAAGCTATGGAAAATGTTTTGCCTGCAAAGTATGAGGAAGCGAGGGAGGAAGAGAAGTTGCGGACTCAGCGCGAAGATTTTAGTGATTTGGTTGCAGAGAATTCCAAGAAGAGGAAGAGAAAGATGCAAGAGAAGGAGGGGAAGTCAAAGAAGAAAGACTTCAAATTTTAG 1767 0.459 MAAETLPYDNGVVANGDLSATSNSTAAAKKSRESERRRRRRKQKKNKASQESESNAAEDGEAADIADDNAKENKDPQQAVENVEVEYVPEKAELDEGLDEEFRKIFEKFSFTDVTSTEDTDKKDESAENAAATKKADSDSEEEENDNEQKEKGISNKKKKLQRRMKIAELKQICLRPDVVEVWDATAADPKLLVFLKSYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEKIRQAYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTSLGDLYHEGKEFEVKLREMKPGLLSYDLKEALGMPEGAPPPWLINMQRYGPPPSYPHLKIPGLNAPIPPGASFGYHPGGWGKPPVDEYGRPLYGDVFGVLQQEQPNYEEEPVDKTKHWGDLEEEEEEEEEEEEEEEEEEQEMEEEELQDGIQSVDSLSSTPTGVETPDFIDLRKQQRKDSERPLYEVLEEKEERIAPGTLLGTTHTYVVNTGAQDKPGAKRVDLLRGQKSDKVDVTLQPEELEAMENVLPAKYEEAREEEKLRTQREDFSDLVAENSKKRKRKMQEKEGKSKKKDFKF 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1749 588 Coils Coil 408 440 - -
Lele15g1749 588 MobiDBLite consensus disorder prediction 115 140 - -
Lele15g1749 588 MobiDBLite consensus disorder prediction 1 94 - -
Lele15g1749 588 MobiDBLite consensus disorder prediction 115 158 - -
Lele15g1749 588 PANTHER SPLICING FACTOR 3B 21 588 - -
Lele15g1749 588 Coils Coil 131 171 - -
Lele15g1749 588 MobiDBLite consensus disorder prediction 395 473 - -
Lele15g1749 588 Pfam PSP 310 355 IPR006568 -
Lele15g1749 588 MobiDBLite consensus disorder prediction 64 79 - -
Lele15g1749 588 Pfam Domain of unknown function (DUF382) 176 301 IPR007180 GO:0005634
Lele15g1749 588 MobiDBLite consensus disorder prediction 412 440 - -
Lele15g1749 588 SMART testneu 306 359 IPR006568 -
Lele15g1749 588 MobiDBLite consensus disorder prediction 543 588 - -
Lele15g1749 588 MobiDBLite consensus disorder prediction 441 455 - -
Lele15g1749 588 MobiDBLite consensus disorder prediction 397 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1749 Lele-ChrLele15 10507252 10513688 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele14g0637 14 17774222 17785923 Lele15g1749 15 10507252 10513688 CCT
Lele15g1734 15 10387597 10399732 Lele15g1749 15 10507252 10513688 CCT
Lele16g1772 16 10395349 10409105 Lele15g1749 15 10507252 10513688 CCT
Lele13g0730 13 19279132 19283319 Lele15g1749 15 10507252 10513688 hybridization
Lele14g0626 14 17684163 17692340 Lele15g1749 15 10507252 10513688 hybridization