LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele15g1735	ATGGCTGTCTGTTGTGGCTGCTTTGGAGGATCAACTATAAAGAAGAAAAGGAGTCCTACTCATAATCCTAACGAGGCTGATGGCGTTGCACTTGATAATGTTAAGAATTTCTCCGATAAAGAACTAAGGTTGGCAACAGATAATTATGACTCAAGGAACAAGATAGGAAGGGGAGGTTTTGGAACTGTTTACCAGGGAACCTTGAGGGATGGAAGACAGATAGCAGTGAAAACCCTTTCTGCAGGATCAAGGCAAGGAGTCCGTGAATTTTTAACTGAAATCAAGACTATATCAAATGTTAAGCATCCAAACCTTGTTGAATTGATTGGTTGCTGTGTTCAAGGATCTAGTCGTATTTTAGTATACGAGTATGTGGAAAATAACAGCCTTGATCGTGCATTACTTGGCACGAGGAATACAGGCATCAAACTAGACTGGAGAAGAAGATCTGCAATTTGCATGGGTTCTGCTAGAGGTCTTGCATTCCTTCATGAGGAACTTGTTCCACACATTGTGCACAGAGACATCAAAGCTAGCAACATACTACTTGACAAAGACTTTAACCCGAAAATAGGAGACTTTGGGTTGGCTAAATTATTCCCTGATGACATCACTCACATTAGCACTAGAATTGCTGGAACAACCGGTTATCTAGCACCAGAATATGCATTAGGTGGTCAGTTAACCATGAAGGCTGATGTATACAGCTTTGGAGTTCTTGTACTAGAAATAATTAGTGGCAAAAGCAGTTCAAGGGCAAATTTGGGGGGAACTGACAAAGTCCTCTTGGAATGGGCTTGGCAACTTCATGAAGAAGGGAGACTTTTGGAGCTAGTTGATCCAGAGATTGGAGAATTTCCTGAGGAAGAAGTGATTAGGTACATGAAGGTAGCTTTTTTCTGCACACAGGCAGCAGCAAACAGAAGGCCACTAATGTCCCAGGTTGTGGATATGCTGTCCAGGAAAATCCGGCTCAATGAGAAGGAGATAACAGCGCCAGGATTCTTCCAGAATTCTGGAGAATCCTCTAGAAAGAACCTATCCAGTGGGTCTACTAGCAATCAAACTCATTCTCTTCCTCCCACTATTACTCAGGTAACCCCTCGATGA	1110	0.4252	MAVCCGCFGGSTIKKKRSPTHNPNEADGVALDNVKNFSDKELRLATDNYDSRNKIGRGGFGTVYQGTLRDGRQIAVKTLSAGSRQGVREFLTEIKTISNVKHPNLVELIGCCVQGSSRILVYEYVENNSLDRALLGTRNTGIKLDWRRRSAICMGSARGLAFLHEELVPHIVHRDIKASNILLDKDFNPKIGDFGLAKLFPDDITHISTRIAGTTGYLAPEYALGGQLTMKADVYSFGVLVLEIISGKSSSRANLGGTDKVLLEWAWQLHEEGRLLELVDPEIGEFPEEEVIRYMKVAFFCTQAAANRRPLMSQVVDMLSRKIRLNEKEITAPGFFQNSGESSRKNLSSGSTSNQTHSLPPTITQVTPR	369

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele15g1735	369	ProSiteProfiles	Protein kinase domain profile.	49	336	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele15g1735	369	SUPERFAMILY	Protein kinase-like (PK-like)	34	339	IPR011009	-
	Lele15g1735	369	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	171	183	IPR008271	GO:0004672\|GO:0006468
	Lele15g1735	369	Gene3D	Phosphorylase Kinase; domain 1	20	124	-	-
	Lele15g1735	369	PANTHER	CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3	32	353	-	-
	Lele15g1735	369	Gene3D	Transferase(Phosphotransferase) domain 1	125	334	-	-
	Lele15g1735	369	CDD	STKc_IRAK	55	321	-	-
	Lele15g1735	369	FunFam	cold-responsive protein kinase 1	20	124	-	-
	Lele15g1735	369	MobiDBLite	consensus disorder prediction	334	369	-	-
	Lele15g1735	369	FunFam	Putative LRR receptor-like serine/threonine-protein kinase	125	331	-	-
	Lele15g1735	369	Pfam	Protein tyrosine and serine/threonine kinase	52	318	IPR001245	GO:0004672\|GO:0006468
	Lele15g1735	369	ProSitePatterns	Protein kinases ATP-binding region signature.	55	77	IPR017441	GO:0005524
	Lele15g1735	369	SMART	serkin_6	49	336	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele15g1735	Lele-ChrLele15	10408940	10413984	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele15g1735	12	361	Receptor kinase-like Gene Family	AT1G56120	50.700	6.07e-113	347

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Lele15g1735		PK_Tyr_Ser-Thr	2.7e-45	CL0016