Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1730 ATGGCGACTCCAGCTCCGAAACACTTGTTCTCTGGATCTTCATCTTCTTCTCCTTCATTTTTACCTTCAACCTCAACGAAACACCTCTCCCTCCCTTTTTCTTCAATCTCGAAGAAGCCTGTTCATTCACGTGCTATTCGGATCTCCAGCTCCATCTCCAATCCAAGCGGACCAAGCCCAAAACCAGCACAAGCATCTTCCGCTGCTGTCCCCACCACCACCACCGCTGACTCGGAAGCTTTCGTTTCCCGATTTGCCCCTGACGAGCCCAGGAAGGGCGCTGATATCCTTGTTGAAGCTCTTGAGCGCCAAGGCGTTACCGATGTCTTCGCCTACCCGGGCGGTGCTTCATTGGAGATCCATCAGGCGCTCACGCGCTCCAATATCATCCGTAACGTCCTTCCGCGCCATGAGCAAGGCGGTGTTTTCGCCGCCGAGGGATACGCTCGCTCATCCGGCCGTCCCGGCGTCTGCATCGCCACGTCCGGTCCCGGCGCCACCAATCTGGTCAGTGGTCTTGCCGATGCGCTGCTTGATAGCGTACCTCTGGTCGCCATAACAGGGCAAGTCCCTCGAAGGATGATCGGTACTGATGCGTTCCAGGAGACGCCCATTGTTGAGGTAACAAGATCGATCACGAAGCATAATTATCTTGTTCTTGATGTTGACGATATTCCTAGGATTGTGAAGGAGGCGTTCTTCTTAGCTACTTCGGGGAGACCAGGCCCAATATTAATCGACGTGCCAAAAGATATACAGCAACAGCTTGCGATTCCTAACTGGGACCAACCGATTAAGCTGCCAGGATACACGGCGAGGCTTCCGAAGTCGCCGGATTGGAATCTGTTAGAGCAGATTGTGAGGTTGATATTGGACTCCAAGAAGCCAGTTCTGTATGTTGGCGGTGGTTGTATGAACTCAAGCGAGGAATTGAGGCGATTTGTGGAACTTACTGGAATCCCTGTTGCTAGTACTTTGATGGGCCTAGGAGTATATCCCATTCCTGACGAATATTCCCTCCAAATGCTAGGAATGCATGGGACAGTGTACGCTAATTATGCCATTGATAAAAGTGATCTGTTGCTTGCATTTGGGGTGAGGTTTGATGATCGGGTGACAGGAAAGCTTGAAGCCTTCGCTAGTCGAGCTAAAATTGTTCATATAGACATTGATTCAGCTGAGATAGGAAAAAACAAGCAGCCTCATGTGTCCGTTTGTGCAGATTTGAAGTTAGCTTTAAAGGCCATTAATCAGATACTAGAGAGCAAAGGGATCAAAGATAAAGTTGATTTTCAAGCTTGGAGAGAAGAGCTGAGCGAGCAAAAACGCAAATTCCCATTAGGTTACAAGACCTTTGAGAAATGCATTTCTCCTCAGTATGCTATTCAGGTATTGGATGAACTGACAAATGGAGATGCAATAATAAGTACGGGAGTAGGACAACACCAGATGTGGGCGGCTCAATTTTACAAATATAAGAGACCTAGACAGTGGTTAACATCAGGGGGTCTTGGGGCTATGGGTTTTGGATTGCCTGCTGCAATTGGGGCTGCTGTGGCTAACCCAAACACTCTTGTAGTGGACATTGATGGTGATGGAAGTTTCGTGATGAATGTTCAGGAACTAGCCACTATAAAGGTGGAGAATCTCCCAATTAAGATACTGTTGTTGAATAATCAACACTTGGGTATGGTTGTTCAGTGGGAGGATCGGTTTTATAAATCTAACAGAGCTCACACATATCTGGGAAACCCATCTAAGGAGACTGAGATCTTCCCAAATATGTTGAAGTTTGCTGAAGCTTGTGGCATACCAGCAGCTCGAGTGACCAAGAAAGAGGACCTTAGAGCAGCAATTCTGAAAATGTTGGATACTCCTGGTCCCTATCTTCTCGATGTTATAGTTCCCCATCAAGAGCATGTCTTGCCCATGATTCCAAGTAATGGAACCTTCAATGATGTGATAACAGAGGGTGATGGCAGAACATCTAAGTAA 1995 0.4762 MATPAPKHLFSGSSSSSPSFLPSTSTKHLSLPFSSISKKPVHSRAIRISSSISNPSGPSPKPAQASSAAVPTTTTADSEAFVSRFAPDEPRKGADILVEALERQGVTDVFAYPGGASLEIHQALTRSNIIRNVLPRHEQGGVFAAEGYARSSGRPGVCIATSGPGATNLVSGLADALLDSVPLVAITGQVPRRMIGTDAFQETPIVEVTRSITKHNYLVLDVDDIPRIVKEAFFLATSGRPGPILIDVPKDIQQQLAIPNWDQPIKLPGYTARLPKSPDWNLLEQIVRLILDSKKPVLYVGGGCMNSSEELRRFVELTGIPVASTLMGLGVYPIPDEYSLQMLGMHGTVYANYAIDKSDLLLAFGVRFDDRVTGKLEAFASRAKIVHIDIDSAEIGKNKQPHVSVCADLKLALKAINQILESKGIKDKVDFQAWREELSEQKRKFPLGYKTFEKCISPQYAIQVLDELTNGDAIISTGVGQHQMWAAQFYKYKRPRQWLTSGGLGAMGFGLPAAIGAAVANPNTLVVDIDGDGSFVMNVQELATIKVENLPIKILLLNNQHLGMVVQWEDRFYKSNRAHTYLGNPSKETEIFPNMLKFAEACGIPAARVTKKEDLRAAILKMLDTPGPYLLDVIVPHQEHVLPMIPSNGTFNDVITEGDGRTSK 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1730 664 Pfam Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 478 633 IPR011766 GO:0003824|GO:0030976
Lele15g1730 664 TIGRFAM acolac_lg: acetolactate synthase, large subunit, biosynthetic type 92 656 IPR012846 GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660
Lele15g1730 664 FunFam Acetolactate synthase 86 269 - -
Lele15g1730 664 MobiDBLite consensus disorder prediction 44 75 - -
Lele15g1730 664 FunFam Acetolactate synthase 276 447 - -
Lele15g1730 664 SUPERFAMILY DHS-like NAD/FAD-binding domain 278 446 IPR029035 -
Lele15g1730 664 CDD TPP_PYR_POX_like 95 250 - -
Lele15g1730 664 Pfam Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 92 255 IPR012001 GO:0030976
Lele15g1730 664 ProSitePatterns Thiamine pyrophosphate enzymes signature. 515 534 IPR000399 GO:0000287|GO:0030976
Lele15g1730 664 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 456 656 IPR029061 -
Lele15g1730 664 PANTHER THIAMINE PYROPHOSPHATE ENZYMES 90 653 IPR045229 -
Lele15g1730 664 FunFam Acetolactate synthase, mitochondrial 447 663 - -
Lele15g1730 664 CDD TPP_AHAS 456 647 IPR039368 GO:0030976
Lele15g1730 664 Gene3D - 80 274 - -
Lele15g1730 664 Gene3D - 283 447 - -
Lele15g1730 664 Pfam Thiamine pyrophosphate enzyme, central domain 284 415 IPR012000 GO:0000287|GO:0030976
Lele15g1730 664 MobiDBLite consensus disorder prediction 1 75 - -
Lele15g1730 664 MobiDBLite consensus disorder prediction 8 37 - -
Lele15g1730 664 Gene3D - 448 634 - -
Lele15g1730 664 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 88 269 IPR029061 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1730 Lele-ChrLele15 10362948 10364942 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g0748 13 19419246 19421249 Lele15g1730 15 10362948 10364942 hybridization
Lele14g0640 14 17796835 17798826 Lele15g1730 15 10362948 10364942 hybridization