Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1725 ATGGAGCCTCAAGGGTCCTCAGTTGATGGGAAAGAGACAGCGATAGAAGCTTGGGGGAGTGAGAGAAGAAACCGAAGTAAAATTGTGCATTGGTGGTTAACAATAACACGTCCACAGTATACTACGATCACTTTTAAGAAGCCATCCTATGAAGAGTGTAGCTTTCATCCCCATCGCCATTACTGGATATCCAGCAAACGTATTGTGACCCCGCAAGGGGTTATTTCTGGTTCAGTGGAGATAAATGAAGGGAAGATCGTGTCTATTGTTAAAGGAGATAGTAAACAAGTAATTGACTATGGAGATGCTGTGGTCATGCCTGGCTTAATTGACGTGCATGTACATCTTGATGAGCCAGGAAGAACTGAATGGGAAGGATTTTTTACTGGGACAAGGGCTGCTGCTGCTGGTGGTGTAACAACAGTGGTTGACATGCCTCTAAATAATCACCCGACAACAGTGTCTAAGGAAACACTGGAACTTAAGCTTGAGGCTACTAAGAAGAAACTCTATGTTGATGTTGGTTTCTGGGGAGGTCTAATCCCTGAAAATGCACTTAATACGAGTATTTTGGAAGGTCTCTTACGTGCTGGAGTTCTCGGTGCCAAGTCTTTCATGGTTCCTTCAGGGATTAATGACTTTCCTATGACAACTATTGATCACATCAAGGAGGGACTGCCTGTGCTGGCCAAGTATAGAAAACGTTTACTTGTGCATGCTGAGATTCAACTAAATTCAGGACATGATTTGGAACTCAAAGATAATGATGATCCTCGTCATTACTCAACCTATCTCAAGACTAGGCCACCTTCATGGGAGCAGGCAGCGATTAGAGAACTTGTAGGCGTTACAAAGGATACTGGAAGTGGTGGTCCTTTAGAAGGAGCGCATGTCCATATTGTTCACTTGTCTGATTCAAGTGCTTCCTTAGATATGATTAAGGAAGCAAAACGTAGAGGTGACAGCATTAGTGTTGAGACCTGCTCACATTACTTGGCTTTCTCATCTGAAGAGATAAAAGATGGAGATACTCGTTTCAAGTGTTCCCCGCCTATTCGTAGTGCATCCAATAGAGAAAAATTATGGGAGGCTTTGCTGGAAGGGGACATTGACTTTTTAACTTCTGATCATTCACCAACAGTGCCTGAACTCAAGCTTCTTGATGAGGGTAACTTCTTGAAGGCTTGGGGTGGCATATCGTCTTTACAGTTCGATCTTCCCATAACATGGACATATGGACAAAAACACGGAGTAACTCTGGAAAAACTATCATTATGGTGGAGCAAGAGACCTGCAGAATTTGCTGGATTAGAATCAAAGGGGGGCATTGAAGTTGGAAAAGATGCTGATATTGTAGTGTGGCAACCAGAGACAGAGTTTGTCCTGGATGACAAGTATCCTGTTTTCATTAAAAATCCTAGCATCTCTGCCTATATGGGAAAGAAGTTATCAGGACAAGTGTTGGCGACTTTTGTGAGAGGAAACCTTGTCTTCAAGAATGGCAAGCATGCTCCTGCACCCTGTGGTGTTCCAATCCTTGCTAATTGA 1548 0.4322 MEPQGSSVDGKETAIEAWGSERRNRSKIVHWWLTITRPQYTTITFKKPSYEECSFHPHRHYWISSKRIVTPQGVISGSVEINEGKIVSIVKGDSKQVIDYGDAVVMPGLIDVHVHLDEPGRTEWEGFFTGTRAAAAGGVTTVVDMPLNNHPTTVSKETLELKLEATKKKLYVDVGFWGGLIPENALNTSILEGLLRAGVLGAKSFMVPSGINDFPMTTIDHIKEGLPVLAKYRKRLLVHAEIQLNSGHDLELKDNDDPRHYSTYLKTRPPSWEQAAIRELVGVTKDTGSGGPLEGAHVHIVHLSDSSASLDMIKEAKRRGDSISVETCSHYLAFSSEEIKDGDTRFKCSPPIRSASNREKLWEALLEGDIDFLTSDHSPTVPELKLLDEGNFLKAWGGISSLQFDLPITWTYGQKHGVTLEKLSLWWSKRPAEFAGLESKGGIEVGKDADIVVWQPETEFVLDDKYPVFIKNPSISAYMGKKLSGQVLATFVRGNLVFKNGKHAPAPCGVPILAN 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1725 515 SUPERFAMILY Composite domain of metallo-dependent hydrolases 60 506 IPR011059 GO:0016810
Lele15g1725 515 TIGRFAM allantoinase: allantoinase 63 510 IPR017593 GO:0000256|GO:0004038|GO:0008270|GO:0050897
Lele15g1725 515 PANTHER ALLANTOINASE 57 514 - -
Lele15g1725 515 FunFam Allantoinase Dal1 56 501 - -
Lele15g1725 515 Gene3D - 50 501 - -
Lele15g1725 515 SUPERFAMILY Metallo-dependent hydrolases 108 443 IPR032466 -
Lele15g1725 515 Pfam Amidohydrolase family 104 497 IPR006680 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1725 Lele-ChrLele15 10318714 10328343 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele15g1725 15 10318714 10328343 Lele14g0637 14 17774222 17785923 CCT
Lele15g1725 15 10318714 10328343 Lele15g1734 15 10387597 10399732 CCT
Lele15g1725 15 10318714 10328343 Lele16g1772 16 10395349 10409105 CCT
Lele13g0757 13 19483280 19488051 Lele15g1725 15 10318714 10328343 hybridization