Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1697 ATGGGGGATAGTTCAAGTTCGGGATTCAAGGAATATGTGGCCGGTTTGCTCGCTGGGGTTGCGACTGTAGCCACGGGTCATCCATTTGACACAGTGAAGGTGAAGCTGCAAAAACACAATACTGAAGCACATGGGATTCAATATAGGAGTGGTTTGCATTGCACTGCTAGGATACTGAAAACTGAGGGAATTAGAGGACTTTATAGTGGAGCAACGTCATCTTTTATTGGGATGGCTTTTGAAAGCTCACTGCTTTTTGGCATTTATTCCCAGACAAAACTAGCCCTGCAGGGTGGTGTGCCAAGCAGTGTACCACAGCCTCATGTAATAATACCATCTGCAGCTTATGGCGGTGCAATAATCAGTTTTGTGTTGTGTCCATCAGAGCTGGTGAAGTGCAGAATGCAAATCCAAGGCACTGACTCTTTGGTTCCTGCGTCCAGCAGATACAAGAGTCCTCTTGATTGTGCCCTAAGAACTGTAAAAACCCAAGGGGTGGCTGGAATCTTTCGTGGTGGTTATACAACATTGCTTAGAGAATCTATAGGAAATTCTGTGTTTTTCACTGTTTATGAATATGTGCGTTATCACGTGCATTCACATATTAAAGCTGCCTCGTCCAATTACAGTAACTTGATTGACATGGGAATTGGGTTCGTTTCTGGTGGCCTCAGTGGTGTAGCTTTTTGGTTGGCTGTTTTGCCCCTGGACGTGGCGAAAACCATTATTCAGACTAACCCTGATAAAAATTGTCCAAGGAATCCTTTTCAAGTCTTGAGTAATATTTACAGGAGGGCTGGATTAAACGGGCTTTACACGGGCTTGGGCCCCACAGTTGCCAGAGCATTTCCTGCTAATGCAGCAGCAATTGTCACCTGGGAGCTAGCAATGAAAATGTTAGGCATTAAACATGACTAA 918 0.4466 MGDSSSSGFKEYVAGLLAGVATVATGHPFDTVKVKLQKHNTEAHGIQYRSGLHCTARILKTEGIRGLYSGATSSFIGMAFESSLLFGIYSQTKLALQGGVPSSVPQPHVIIPSAAYGGAIISFVLCPSELVKCRMQIQGTDSLVPASSRYKSPLDCALRTVKTQGVAGIFRGGYTTLLRESIGNSVFFTVYEYVRYHVHSHIKAASSNYSNLIDMGIGFVSGGLSGVAFWLAVLPLDVAKTIIQTNPDKNCPRNPFQVLSNIYRRAGLNGLYTGLGPTVARAFPANAAAIVTWELAMKMLGIKHD 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1697 305 FunFam Mitochondrial amino acid carrier 180 304 - -
Lele15g1697 305 Pfam Mitochondrial carrier protein 7 97 IPR018108 -
Lele15g1697 305 Pfam Mitochondrial carrier protein 219 301 IPR018108 -
Lele15g1697 305 Pfam Mitochondrial carrier protein 113 197 IPR018108 -
Lele15g1697 305 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 5 300 - -
Lele15g1697 305 FunFam Mitochondrial carrier protein 2 109 - -
Lele15g1697 305 Gene3D Mitochondrial carrier domain 113 305 IPR023395 -
Lele15g1697 305 Gene3D Mitochondrial carrier domain 2 112 IPR023395 -
Lele15g1697 305 ProSiteProfiles Solute carrier (Solcar) repeat profile. 105 197 IPR018108 -
Lele15g1697 305 SUPERFAMILY Mitochondrial carrier 7 294 IPR023395 -
Lele15g1697 305 ProSiteProfiles Solute carrier (Solcar) repeat profile. 213 299 IPR018108 -
Lele15g1697 305 ProSiteProfiles Solute carrier (Solcar) repeat profile. 6 95 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1697 Lele-ChrLele15 10076638 10081742 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1697 25 300 Antiporters AT1G79900 30.249 1.34e-36 131
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele15g1697 15 10076638 10081742 Lele13g0788 13 19729397 19730209 CCT
Lele15g1697 15 10076638 10081742 Lele14g0677 14 18082646 18088632 CCT
Lele15g1697 15 10076638 10081742 Lele15g1696 15 10070064 10074132 CCT
Lele15g1697 15 10076638 10081742 Lele16g1731 16 10060395 10064437 CCT
Lele13g0786 13 19715073 19720179 Lele15g1697 15 10076638 10081742 hybridization
Lele14g0676 14 18071951 18077006 Lele15g1697 15 10076638 10081742 hybridization