Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1667 ATGCATCAAGCCATTCCATATAGGACCTGGCTCCCCGCCGGAGCACGTGCCTCACGTGACCTTTCTACTGCGGTGGTGACCACCGGAGGAATTACTGGACAGGCCGATGTTGTTGATCCCGGTACTGTGGCGACGATGGTATCGCAGAACGCTGTGATAATAATTGGAAAACGAGGGTGCTGCATGTGCCACGTTGTGCAGAGGTTGTTACAAGGTCTTGGCGTGAACCCTCCCGTGTACGAGGTAGCCGAGGCAGAGGAGGCCGCCGTGGCCGGCGAGCTGTCCAGGAAGATTGGGTTCTGCGGCGGCGTCGAAGGAATCCAGTTCCCGGCGGTGTTTGTGGGAGGGAAGTTGTTTGGAGGATTGGAAAGAGTGATGTCCACACATATCTCCGGCGAGCTGGTTCCGATCCTGAAGGACGCCGGGGCCTTGTGGCTCTGA 441 0.5805 MHQAIPYRTWLPAGARASRDLSTAVVTTGGITGQADVVDPGTVATMVSQNAVIIIGKRGCCMCHVVQRLLQGLGVNPPVYEVAEAEEAAVAGELSRKIGFCGGVEGIQFPAVFVGGKLFGGLERVMSTHISGELVPILKDAGALWL 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1667 146 Gene3D Glutaredoxin 41 145 - -
Lele15g1667 146 Pfam Glutaredoxin 52 118 IPR002109 -
Lele15g1667 146 PANTHER GLUTAREDOXIN 43 146 IPR011905 -
Lele15g1667 146 SUPERFAMILY Thioredoxin-like 43 145 IPR036249 -
Lele15g1667 146 ProSiteProfiles Glutaredoxin domain profile. 40 145 - -
Lele15g1667 146 TIGRFAM GlrX-like_plant: glutaredoxin-like family 43 146 IPR011905 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1667 Lele-ChrLele15 9927438 9927878 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1667 26 146 Miscellaneous Gene Families AT3G02000 41.935 6.82e-24 88.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele15g1667 15 9927438 9927878 Lele13g0807 13 19825420 19834510 CCT
Lele15g1667 15 9927438 9927878 Lele14g0697 14 18197049 18205890 CCT
Lele15g1667 15 9927438 9927878 Lele15g1672 15 9963121 9972214 CCT
Lele15g1667 15 9927438 9927878 Lele16g1709 16 9943797 9952800 CCT
Lele15g1667 15 9927438 9927878 Lele15g1667 15 9927438 9927878 ECH
Lele15g1667 15 9927438 9927878 Lele16g1703 16 9888867 9889331 ECH
Lele13g0812 13 19865545 19865997 Lele15g1667 15 9927438 9927878 hybridization
Lele14g0703 14 18251604 18252068 Lele15g1667 15 9927438 9927878 hybridization