Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1663 ATGGATAGCCATGGAGCTGAAGAATTGCTCCAAGCACAGGCTCATTTTTACAAGCTCGTATTCAACTCTATCAGTACCATGTCTCTTAAAAGTGCAATCGACCTTGGCATACCAGACATAATCCACAGCCACGGCCAACCCATGACTCTCCCTGAGCTGGTCTTGGCACTTGAGATTGAACCCGCGAAATTCAGTTTTCTCTGTAGACTCGTGCGCTTCTTGGTTCACTCTGGCATTTTTTAGGAGGTGAACCATTTTCACTGTACATATGGGATGGGATTTTGGGAGTATGGAAGTGAGAATCCTGAGTATGCCAAGCTTTATAATGAACCTATGTCGATGGTTGGTGTTGGAGGTGGGAAAGGAGCTGTGGCTAGGATCATTTCTGAGGAGTTTCCCCATATGAAATGCACAGTGCTTGATCTTCCCCATGTCGTTGGGGATTTGCAGGACAGTGAAAATCTCAAGTTTGTTGGAGGTTTCACCATATTACTCCTGCCGACTCCATTCTCCTCAGGTCACAGAAGAGAAAGAGGGGAAAGAGAATGGAAGAAGCTCTTCTTGGAAGCAGGGTTCAGACATTGCAAGATAACACCCTTCTTTGGTTTAAGATCGCTTCTTGAAGTACGTAATTGTATTCATCAGAAGAAGAGAGGAATCTGCAAAAATGTTTTCAACCAAGGAAAGGTAGAGGCAGAGTTGTTTCAAGCTCAGTCCCATTTGTATACACACGTATTCAATTTCTTGGGCCCCATGTGTCTAAAGAGTGCTCTGCAGCTGAAAATCCCAGGCATAATCCACAGCCATGGCCGACCCATCACCCTCCCTGAGCTGATCTCTGCTCTCCAGATAGACCCTTCAAAATCTTCCTATCTTTATAGGCTCATGCGCTTACTGGCTCATTCTGGCATCTTCTCAACTACCAAAGCCCCTAAAGGTGATGAGGAAGAAGAGGGATATGATCTCACACCTTCCTCTAGGCTTCTGCTCAAAAGACAATATCCCAAGCTTGCTAATTATGCTCAGATAATGTTTAATCCAGCTATGGTGCATGCATCGGAATCTTTGGGAGATTGGTTTCGAAGTAGTGATCCCAACCCCTTTCACACTGCACATGGGAAGGGATTTTGGGACTATCTCGGCCAAAAGAAGGAGTTTAACAGATCCTTTAACGAAGCTATGATTGGTGATTCAATTATGATGGACTTGGTAATTAAAGACCGAAAATCAGTCTTTGAGGGATTCGACTCATTGGTTGATGTTGGGGGTGGCAATGGATCTGCGGCTAGGATCATAGCTGAGTCATTGCCTAATCTGCAATGCACTGTGCTAGATCTCCCACATTTGGTTTTACATGCTTACAGTGATGAAGACTATGTGAAGGTTCTCAAGAAGTGCAGGGAAGCCATGGCATGCAAAGGCAAAGGAGGGAAAGTGATTATTGTAGACATAGTGATCAATGACAAGAAAGATGAAGACGATCTGAAAGATGCTAAGCTGTTCTTCGATGTGTTGATGATGGCTGTGGTCACTGGAAGAGAGAGAGAAGAAAAAGAATGGGAGAAGTTGATTGAAGCCAGTCGTCGTGCTCAAGGCTTGCTTCGCGAGATGATCCGCCAGAGTGTTTGCATTTCGAGGAATCGGGTCCACCTTCACAGTCCAATATCGATCGATGAATGCTCTCGCTTCTAG 1692 0.4498 MDSHGAEELLQAQAHFYKLVFNSISTMSLKSAIDLGIPDIIHSHGQPMTLPELVLALEIEPAKFSFLCRLVRFLVHSGIFXEVNHFHCTYGMGFWEYGSENPEYAKLYNEPMSMVGVGGGKGAVARIISEEFPHMKCTVLDLPHVVGDLQDSENLKFVGGFTILLLPTPFSSGHRRERGEREWKKLFLEAGFRHCKITPFFGLRSLLEVRNCIHQKKRGICKNVFNQGKVEAELFQAQSHLYTHVFNFLGPMCLKSALQLKIPGIIHSHGRPITLPELISALQIDPSKSSYLYRLMRLLAHSGIFSTTKAPKGDEEEEGYDLTPSSRLLLKRQYPKLANYAQIMFNPAMVHASESLGDWFRSSDPNPFHTAHGKGFWDYLGQKKEFNRSFNEAMIGDSIMMDLVIKDRKSVFEGFDSLVDVGGGNGSAARIIAESLPNLQCTVLDLPHLVLHAYSDEDYVKVLKKCREAMACKGKGGKVIIVDIVINDKKDEDDLKDAKLFFDVLMMAVVTGREREEKEWEKLIEASRRAQGLLREMIRQSVCISRNRVHLHSPISIDECSRF 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1663 563 SUPERFAMILY "Winged helix" DNA-binding domain 7 91 IPR036390 -
Lele15g1663 563 Gene3D Vaccinia Virus protein VP39 450 533 IPR029063 -
Lele15g1663 563 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 338 526 IPR029063 -
Lele15g1663 563 Gene3D - 223 329 IPR036388 -
Lele15g1663 563 Gene3D - 1 102 IPR036388 -
Lele15g1663 563 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 63 209 IPR029063 -
Lele15g1663 563 PANTHER O-METHYLTRANSFERASE 8 92 IPR016461 GO:0008168
Lele15g1663 563 FunFam Coniferyl alcohol 9-O-methyltransferase 225 329 - -
Lele15g1663 563 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 242 563 IPR016461 GO:0008168
Lele15g1663 563 SUPERFAMILY "Winged helix" DNA-binding domain 230 332 IPR036390 -
Lele15g1663 563 Pfam Dimerisation domain 27 75 IPR012967 GO:0046983
Lele15g1663 563 Pfam Dimerisation domain 252 300 IPR012967 GO:0046983
Lele15g1663 563 Pfam O-methyltransferase domain 355 453 IPR001077 GO:0008171
Lele15g1663 563 Pfam O-methyltransferase domain 113 157 IPR001077 GO:0008171
Lele15g1663 563 Gene3D Vaccinia Virus protein VP39 103 169 IPR029063 -
Lele15g1663 563 Gene3D Vaccinia Virus protein VP39 331 449 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1663 Lele-ChrLele15 9888627 9895619 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1663 251 527 Monolignol Biosynthesis Gene Families AT5G54160 30.599 4.01e-29 117