Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1660 ATGCCCAATTATAACGTAGCAGATAAGGGTGACGACGTGGAAGCAGCAACTGAAATTGAAACAACTGAGGAAATAGAAATACCCTCTTATCCTAAAATGGAGTGGGTGGTGGGAGGGAGGAGGGAGCGAGAGCCGAACCATATTGAAAACCACCAGCACTATCCGAAACTTGAAAAGGGTTTTGCTGCTATAACTTGCGGGTTAACAATGAAGAAGATTTCTAAGACCAGCTGCAAGTCAGCATCGCACAAGCTCTTTAAGGACAAGGCAAAGAACCGTGTTGATGATTTGCAGGTCATGTTCATGGATCTGCAGTTTGCTAGGAAGGAAAGCCGTACAGTTGATGCTGCAGTTCTTGAGGAGCAAGTCCACCAGATGCTTCGTGAGTGGAAAGCAGAGCTCAATGAGCCCTCCTCTGCTTCTTCTTTGCAGCAGGGTGGCGGTCTCGGGTCATTCTCAACTGATATCTGCCGGCTATTGCAGCTCTGTGATGAGGAAGATGATGCTACCAGTCCATTAGCCGTGCCTAAGACTGAACCTAATGTTCACAACCTGCAAACTGGGTGTAATGTGATAGTCCAAGAGGACCAAAAGCAACATGAATTCCCATTGATTGATGAGCGTAAACATTCCACCTCAGGAGTTTGCAGTGTGGCAAATAACTTTGAAGGAGCAACTCTAGAGTATCAATTTGATCCGAATCAGGATTTTGATCGCAGCTTTTATGCTTGTTTTAATGATTCAGTTTTTTGTGAGGAGGATAGCATTCATCATGTAACTAGCTATGTACCAAGTGTCGTCCCTCCTCCTTCTGCTTTCTTGGGCCCAAAATGTGCACTCTGGGACTGCCCAAGGCCTGCTCAAGGATTGGAGTGGTGTCAAGACTATTGCAGCAGCTTTCATGCTGCGCTAGCATTGAATGAAGGGCCACCAGGCATGGCTCCAGTCCTACGACCTGGAGGAATTGGTTTGAAGGATAATTTGCTTTTTGCTGCTCTTCGTGCAAAGGCACAAGGAAAAGATGTTGGCATCCCAGAATGTGAAGGAGCAGCAACTGCTAAGTCTCCATGGAATGCGCCTGAGCTTTTTGATCTTTCTGTTCTTGAGGGCGAAACTATTAGGGAGTGGCTCTTCTTTGATAAGCCTCGAAGAGCATTTGAAAGTGGAAACAGAAAGCAGAGGTCATTGCCGGATTACAGTGGACGTGGTTGGCATGAATCTAGGAAGCAAGCGATGAACGAATTTGGTGGTCTGAAGAGATCCTATTATATGGACCCACAACCGCTGAACCATTTTGAGTGGCACCTTTATGAATATGAGATGAACAAGTGTGATGCATGTGCATTGTATCGGTTGGAACTGAAGCTTGTAGATGGAAAGAAAAATTCCAAGGTGAAGGTATCGAGTGATTCAGTTGCTGATCTGCAGAAGCAGATGGGAAGGCTTTCTGCTGAGTTTCCACATGAAAACAAACGGCCTGCCAAAAGCAGGGCCAAACTTAATGCGAAGGTTGGCATGGGTGGTGGTGTATATTCTGCTTCAAACAGATTTACTACTCTTAATGGAACATCCGAGTATGGATTAGCTGCAACGTATGACTATCTTGTTGAGAACATCAGCGACTATTATATAACATGA 1638 0.4542 MPNYNVADKGDDVEAATEIETTEEIEIPSYPKMEWVVGGRREREPNHIENHQHYPKLEKGFAAITCGLTMKKISKTSCKSASHKLFKDKAKNRVDDLQVMFMDLQFARKESRTVDAAVLEEQVHQMLREWKAELNEPSSASSLQQGGGLGSFSTDICRLLQLCDEEDDATSPLAVPKTEPNVHNLQTGCNVIVQEDQKQHEFPLIDERKHSTSGVCSVANNFEGATLEYQFDPNQDFDRSFYACFNDSVFCEEDSIHHVTSYVPSVVPPPSAFLGPKCALWDCPRPAQGLEWCQDYCSSFHAALALNEGPPGMAPVLRPGGIGLKDNLLFAALRAKAQGKDVGIPECEGAATAKSPWNAPELFDLSVLEGETIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQAMNEFGGLKRSYYMDPQPLNHFEWHLYEYEMNKCDACALYRLELKLVDGKKNSKVKVSSDSVADLQKQMGRLSAEFPHENKRPAKSRAKLNAKVGMGGGVYSASNRFTTLNGTSEYGLAATYDYLVENISDYYIT 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1660 545 PANTHER TRANSCRIPTION FACTOR VOZ1 70 539 IPR039277 GO:0006355|GO:0048578
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1660 Lele-ChrLele15 9874723 9880742 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1660 72 544 VOZ-9 Transcription Factor Family AT1G28520 69.168 0.0 670
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF VOZ Lele15g1660 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele15g1660 15 9874723 9880742 Lele15g1660 15 9874723 9880742 ECH
Lele15g1660 15 9874723 9880742 Lele16g1698 16 9836266 9840063 ECH
Lele13g0818 13 19909046 19914411 Lele15g1660 15 9874723 9880742 hybridization
Lele14g0709 14 18298149 18301796 Lele15g1660 15 9874723 9880742 hybridization