Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1657 ATGCCCCCTGCACACCAGCTCCGGCTGGCGGCCGCTTCAACGCGCTTATTTACAAAGAACACAGGCTGCTCCATGCCTGTCACAACTTCGAGGCAAGTTCCTGATACTTCTAGTTCCCTACAATCTCTCACAGAATCTTGGCAGAACAAACCACCCAGCTGGGTGGGTTCAGATCCTTGTGGCAGTGGTTGGGAAGGAATTCGATGCAGTAATTCAAGAGTGACCTCAATATTCAATAGGATCTTTGCAGCAGCTGACTTTTCTGTAAGGATTTCATCTTTAACAATTCTGTTGCTATACCTGAGAATGTCTACACAAATAAGAACTGTCTTGGATCCCAACCGTTTCGATAGGAACCAATTAAGTGGGATTGTGCCTTCAAATATCACCAATCTCAAAAATCTTAGTGATCTGTATTTATCAAATAATAGGTTGAATGGTTCTCTGTCACATCTTACCGGAATGAACCTTCTAACCTATGTGGATCTGAGTAACAATACTTTCAATTCGTCTGATATTCCGTCATGGGCTTCAAGTTTGCCGCTTATGACAACATTGGTATTGAAGGGCAACCAGCTCAGTGGCACCTTAGATATTGGCAATGCCAACAGCAACCGCTTGCAACTTATTGATTTGGAGAATAATACAATCACTGACTTCACGCAGAAAAACATGGACTATAAAGTGTCAGTAGTACTAGTTCGCAACCGGATTTGCCTTGAAGCAGAAGCTTCTACTGAACGTTATTGCCAAGAACCCAACTCCAATTCCTTATTTTCAACGCAGCCAAATAATTGCTCGCCTCTTCCTTGCAGTTCTGGTCATATTTCCACCAGCTTCCTAAGTTCCCAAAGTTTTTCCTTCCTTACTTCTTCATCGGTGATAACTATGGATACTATGGAGGTTTACCGAGCTGTTCTGCCCACTGGAGAACGAGTTGCCATCAAACGGGCTGCAAAAGAATCCATGCAGGGTGCTGTAGAGTTTAAAACTGAGATTGAACTTCTATCAAGGGTCCACCATAAGAATCTTGTCGGCCTTGTGGGTTTCTGTTTTGATAAAGGTGAACAAATGCTGGTGTATGAATATATTCCAAATGGAACTTTAATGGATAGTCTTTCAGATTTCGGACTGTCCAAGCTTCTTGTTGACAGTGAAAGAGGCCACATCACCACTCAAGTTAAAGGGACAATGGTTAGTAAATTCTTGAAACACCTTCTACTCCATGAATAA 1233 0.425 MPPAHQLRLAAASTRLFTKNTGCSMPVTTSRQVPDTSSSLQSLTESWQNKPPSWVGSDPCGSGWEGIRCSNSRVTSIFNRIFAAADFSVRISSLTILLLYLRMSTQIRTVLDPNRFDRNQLSGIVPSNITNLKNLSDLYLSNNRLNGSLSHLTGMNLLTYVDLSNNTFNSSDIPSWASSLPLMTTLVLKGNQLSGTLDIGNANSNRLQLIDLENNTITDFTQKNMDYKVSVVLVRNRICLEAEASTERYCQEPNSNSLFSTQPNNCSPLPCSSGHISTSFLSSQSFSFLTSSSVITMDTMEVYRAVLPTGERVAIKRAAKESMQGAVEFKTEIELLSRVHHKNLVGLVGFCFDKGEQMLVYEYIPNGTLMDSLSDFGLSKLLVDSERGHITTQVKGTMVSKFLKHLLLHE 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1657 410 Gene3D Phosphorylase Kinase; domain 1 298 364 - -
Lele15g1657 410 ProSiteProfiles Protein kinase domain profile. 288 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele15g1657 410 Gene3D Ribonuclease Inhibitor 32 231 IPR032675 -
Lele15g1657 410 ProSiteProfiles Leucine-rich repeat profile. 134 156 IPR001611 GO:0005515
Lele15g1657 410 MobiDBLite consensus disorder prediction 23 57 - -
Lele15g1657 410 Pfam Protein tyrosine and serine/threonine kinase 308 376 IPR001245 GO:0004672|GO:0006468
Lele15g1657 410 MobiDBLite consensus disorder prediction 23 55 - -
Lele15g1657 410 PANTHER RECEPTOR-LIKE PROTEIN 55 115 373 - -
Lele15g1657 410 SUPERFAMILY Protein kinase-like (PK-like) 301 398 IPR011009 -
Lele15g1657 410 SUPERFAMILY L domain-like 38 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1657 Lele-ChrLele15 9856671 9862970 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1657 306 387 Receptor kinase-like Gene Family AT5G49780 69.512 5.50e-30 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Lele15g1657 PK_Tyr_Ser-Thr 1.1e-10 CL0016