Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1653 ATGCCCCGATTACTTGGTCCAATTCCTTTTAATAGCCCAGAAAGTAGCTTGGTGTTTGGAGGAGCGAATAGAATTGTAGTGGTGGGGGTGCCACCAATGGGATGCATTCCACTAATGAAAACGCTGCAGAACAAGAAATACTGTGTGGCAAGCTTGAACAAAGTAGCTTATTCATTCAATGCAAGAATATTGCGCCAACTGGCCACCTTGAAGGCAAAACTGGGCTTAAAAACTGCCTATGTTAATGTCTATAACTCCATACTCAATGCTGTTTTGGATCCCAAAAAACACGGTTTTGAGGAAGGATCAAAGGGATGTTCTGGGAAAGGGACAGTGGAATATGTGGAATCATGCAGAGGAATGGAAACATGTTCGGATCCAAGCAAATATGCATTCTGGGATGCTGTTCATGTCACAGAGATGATGTACAAGATTTTTACAAACATGGCTATTCACGGAAAGCAAGATTCAGCTTCTGAAGGAATTCTCGAGAACATGTGGGCTAAAATCATTAACAGCAAGAATGGATCACAATGGGAAGAACTTCCTAATCTAGATGAAAGAGAAGGATCTATGGAAGTTCTGAGAAGGCTTCCTAGTTTAGGAAGATGGATATCAATGGGAGCTGATTTCTGGGAAGAAATCTTAGATGGGTTTCCAGCTTGTAGCAGTAATGATTCAGGAATTTGCAGTTCTTTTGAATGCAATAAGAAGGTTGAAGAAGAAGAAGAAGCAGTGATATTGAAAGCAGAGAAGAGGGTATCTGCAAAACATTACAGAGGAGTGAGAAGAAGGCCATGGGGGAAATATGCAGCAGAAATCAGAGACTCGTCAAGGAAAGGTGCTAGGGTTTGGCTTGGGACTTTTGATACAGCTGAGGAAGCAGCTTTGGCTTATGATAAAGCTGCTTTGAGAATTAGAGGCCCTAAGGCATACCTGAATTTCCCACTTGAGACGGTTTCAAAGGCCTTCGGATCTGACCAGAAAGGAAATTACTGTCAAGAAAATTTCTGCAGTTCCAGAAAGAGAAGTAGATGTAGTGGGGAGAGAGATGAACTTTTTGGTGTGATGAATGAAGAACCTGCAAAGAAGAAAATGGCAAGCTTGGTGGGAGGGGTGATAGGGAATGAAGAAGATCATGTTTTTGAGTTTCAGGACTTGGGAAGTGATTATTTGGAAAGTTTGTTATCTTCAATTCGATAG 1203 0.4165 MPRLLGPIPFNSPESSLVFGGANRIVVVGVPPMGCIPLMKTLQNKKYCVASLNKVAYSFNARILRQLATLKAKLGLKTAYVNVYNSILNAVLDPKKHGFEEGSKGCSGKGTVEYVESCRGMETCSDPSKYAFWDAVHVTEMMYKIFTNMAIHGKQDSASEGILENMWAKIINSKNGSQWEELPNLDEREGSMEVLRRLPSLGRWISMGADFWEEILDGFPACSSNDSGICSSFECNKKVEEEEEAVILKAEKRVSAKHYRGVRRRPWGKYAAEIRDSSRKGARVWLGTFDTAEEAALAYDKAALRIRGPKAYLNFPLETVSKAFGSDQKGNYCQENFCSSRKRSRCSGERDELFGVMNEEPAKKKMASLVGGVIGNEEDHVFEFQDLGSDYLESLLSSIR 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1653 400 SMART rav1_2 258 322 IPR001471 GO:0003700|GO:0006355
Lele15g1653 400 Gene3D AP2/ERF domain 257 318 IPR036955 GO:0003700|GO:0006355
Lele15g1653 400 FunFam Ethylene-responsive transcription factor 2 257 318 - -
Lele15g1653 400 ProSiteProfiles AP2/ERF domain profile. 258 316 IPR001471 GO:0003700|GO:0006355
Lele15g1653 400 SUPERFAMILY DNA-binding domain 258 318 IPR016177 GO:0003677
Lele15g1653 400 CDD AP2 257 316 IPR001471 GO:0003700|GO:0006355
Lele15g1653 400 Pfam AP2 domain 258 308 IPR001471 GO:0003700|GO:0006355
Lele15g1653 400 Pfam GDSL-like Lipase/Acylhydrolase 21 146 IPR001087 GO:0016788
Lele15g1653 400 Gene3D SGNH hydrolase 15 155 IPR036514 -
Lele15g1653 400 PRINTS Ethylene responsive element binding protein signature 282 298 IPR001471 GO:0003700|GO:0006355
Lele15g1653 400 PRINTS Ethylene responsive element binding protein signature 259 270 IPR001471 GO:0003700|GO:0006355
Lele15g1653 400 PANTHER DNA-BINDING DOMAIN 238 357 IPR044808 GO:0003700|GO:0009873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1653 Lele-ChrLele15 9834117 9836861 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1653 162 399 AP2-EREBP Transcription Factor Family AT4G18450 35.691 2.21e-40 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele15g1653 Lipase_GDSL 7e-12 CL0264