Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1648 ATGGATGTTAGTGATGCTGATCATGCATTACGCTGTTCTTCGCTGCACACGATCTCTTCTGAGTTGGAACGTATGCGTCGGACGCTTCACAGCTTCTTCTCTGGATTATGCTCATTTGAAAGAAGTTACTTCGCATCCGGAATGGGCTCAGGTGATTGGTTTAAGTCGATAATTAGCTTAAGAAAATCAAAAGAAGGCAAATCAAAGAAAGCAAAGGGATTTCCAGCGTCCAAGAAACAAACAGCATCGAAGTTGAAGAATTATACGGGGAAAGATTCAAGTAATTTAACAAATGGCACTGAGGGTTCAAATCTTGTGTCACCTGGGGTATCAGTTGAAACTATTGCTGCAACAATGATCCAGACAGCATTCCGGGCTTATTTGGCTAGAAAATCTCTACGGCGTTTGAAAGGTTGTGCAAAACTTAAGGTCCAGATACAAGGTCATTCTGTTAAAGACCAAGCCAGTAGAGCTGTAAGTTGTATTCATAAATGGAGCAAGATTCAGGCTGAGATCAGAGCTCGCAGAATCTGTATGGTCACTGAAGACAGGATCAGGCGGAAGAAACTTGAATCTCAACTTAAACTTGAGGCAAAGCTCCATGATTTAGAGGTGGAATGGAGTGGTGGTTCCGAAACAATGGAGGAAACCTTAGCAAGGATACATCAGAGAGAAGAAGCAGCAGTTAAGCGGGAAAGATCCATGGCCTATGCTTTTTCTCATCAGTGGAGGGCTAACTCAAACCAAGGGCTCGGTAACTATGAACTTAACAAAGCTAATTGGGGTTGGAGCTGGAAGGAACGCTGGATTGCTGCTCGCCCGTGGGAAAGCCGTGTCGTTGAGAAGCCTGTTAGCCCTAAGAAAGCTCAAACGAAGCAGCCAAAGAAGGTTCAAAGGGACAAGAACCCATCAACACCGAAAACACCTGTTTCGGTTAAACCTCCTGTGACTAATGCAAAAGTGACTCCAAAACCTAGGCGATTATCTTATCCTGCCTCAGATAAAACTGTGGTTCATGAGGAAAGCAATAAATCCTAA 1038 0.4383 MDVSDADHALRCSSLHTISSELERMRRTLHSFFSGLCSFERSYFASGMGSGDWFKSIISLRKSKEGKSKKAKGFPASKKQTASKLKNYTGKDSSNLTNGTEGSNLVSPGVSVETIAATMIQTAFRAYLARKSLRRLKGCAKLKVQIQGHSVKDQASRAVSCIHKWSKIQAEIRARRICMVTEDRIRRKKLESQLKLEAKLHDLEVEWSGGSETMEETLARIHQREEAAVKRERSMAYAFSHQWRANSNQGLGNYELNKANWGWSWKERWIAARPWESRVVEKPVSPKKAQTKQPKKVQRDKNPSTPKTPVSVKPPVTNAKVTPKPRRLSYPASDKTVVHEESNKS 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1648 345 ProSiteProfiles IQ motif profile. 113 141 IPR000048 GO:0005515
Lele15g1648 345 MobiDBLite consensus disorder prediction 80 100 - -
Lele15g1648 345 MobiDBLite consensus disorder prediction 280 345 - -
Lele15g1648 345 PANTHER IQ-DOMAIN 5-RELATED 48 309 - -
Lele15g1648 345 Pfam IQ calmodulin-binding motif 116 134 IPR000048 GO:0005515
Lele15g1648 345 MobiDBLite consensus disorder prediction 68 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1648 Lele-ChrLele15 9798368 9802645 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1648 48 333 IQD Protein Family AT2G33990 51.916 1.52e-87 262
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele15g1648 15 9798368 9802645 Lele15g1648 15 9798368 9802645 ECH
Lele13g0830 13 19992447 19995995 Lele15g1648 15 9798368 9802645 hybridization
Lele14g0722 14 18378497 18380734 Lele15g1648 15 9798368 9802645 hybridization