Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1647 ATGGGTCGCCATACTGGCATGAGGGTGATTGATTGTCTTCTTCCAACGTCAATAGCAATTAGCAATTATAATGTGGGATCGCAGAGACTCCTCGCTTTAGCTCAGCAGCTTCGCCTTTACAAACCCCCATCAATTCATGACGAATTCGATGAGCAAACAATTGAAGAAAATGGGGGGAAGGTTGTTTCCCAGGTCGGGTTTCCAGAGTCCACTATTCTAATTGCTCAAAACCCGGAAAAATTTAGACCTAAACGAGCTGCCGTTTTGATCTGCCTTTTCGAAGGGGATGCTGGGGATCTAAGGGTGATTCTAACTAAGCGATCATCCAAGATGTCAAGTCACTCGGGTGAAGTGGCCTTGCCTGGTGGGAAAGCAGATGAAGGGGATAAGGATGATGACGATACTGCAAAAAGAGAGGCGAAGGAGGAAATTGGGTTGGACCCTGACCTTGTCAATGTGGTTACTTTTCTCGAACCATTCTTATCAAAGTGGTTCCTGTCATTGGAATACTTCATGACGAGAGCATTCAAACCCGTTCTGAATCCTGCTGAAGTGGAATCGGTATTTGATGCACCTTTAGAAATGTTTCTCAAGGATGAAAATCGTTGTCAGGAGGAAAGGGAGTGGAGGGGACAGAAGTATCTACTACATTTCTTTGACTACGAAACCAATCATAAAATATATCTCATATGGTGTTTAACTGCTGGGATCTTGATTAGAGCTGCATCAGTGGTGTATCAACGGCCCCCAGCTTTCGTGGAGCAAAATCCTAGGTTCAAGTTTCCCCAGGATAGCTGTCTTGGCTCATCAGGTTATTCGCCACTTTGCCTCTGTCTGAGCCTGAATAGTGCTTTAGGTTTTCTGCCTGAGCCACATATCCTTTTTGAGGTCCTTGGTATTGAAAGAGTCCACATTCCATGCATCTCAAACGCGAAGCACGCTGTAGAAATGGGTTCGAATAAGTCAGACCCGAGAGTCTCTCAGAGAATACAAGCTTTACTTCAGCATTTACGAAGACCCGAACCTAGCGGCTTCAACAATTCCTCGTCAAGCCAATTCAGACCCACCAAGAGAGCTTCCGTCTTGATCTGCCTCTTCGAAGGGGATGATGGGAATCTACGCGTATTTCTCACTTTGAGGGCTTCGTCTCTGTCAACCCACTCAGGTGAAGTTGCGCTGCCCGGTGGGAAGAGAGAAGAAGGCGATGCTAACGATGTAGAAACGGCCCTGAGGGAGGCTAAGGAGGAGATTGGTTTGGACACTTCTCTTGTTACTGTTATTACTTCTCTTGAGCCATTTGGCACTAAGTATGGTATGATAATAACTCCTGTAATTGGCATACTGTCAAACAAGGATGCATTTACTCCAATGCTAAATCCAAATGAAGTAGAAGCGCTATTTGATGTTCCATTGGAGATGTTCCTCAAGGATGAGAATAGGAGAGATGTGGAAACAGAATGGAGGGGAAAGAAGCATCTAATACATTTCTTTGATTATGAAGTTGATAATAAGAAATATGTGATCTGGGCTGTAACTGCGGCGATGCTAATCAGGGCAGCTTCACTTATATACCAGCGGCCACCAGCATTTGTGGAGTTGAGGCCTAGCTTATGGGGAGGACTTACTGAAAGTGACATTTCAATACTGCAGCGTAGTTCTAAAAAGTGA 1668 0.4496 MGRHTGMRVIDCLLPTSIAISNYNVGSQRLLALAQQLRLYKPPSIHDEFDEQTIEENGGKVVSQVGFPESTILIAQNPEKFRPKRAAVLICLFEGDAGDLRVILTKRSSKMSSHSGEVALPGGKADEGDKDDDDTAKREAKEEIGLDPDLVNVVTFLEPFLSKWFLSLEYFMTRAFKPVLNPAEVESVFDAPLEMFLKDENRCQEEREWRGQKYLLHFFDYETNHKIYLIWCLTAGILIRAASVVYQRPPAFVEQNPRFKFPQDSCLGSSGYSPLCLCLSLNSALGFLPEPHILFEVLGIERVHIPCISNAKHAVEMGSNKSDPRVSQRIQALLQHLRRPEPSGFNNSSSSQFRPTKRASVLICLFEGDDGNLRVFLTLRASSLSTHSGEVALPGGKREEGDANDVETALREAKEEIGLDTSLVTVITSLEPFGTKYGMIITPVIGILSNKDAFTPMLNPNEVEALFDVPLEMFLKDENRRDVETEWRGKKHLIHFFDYEVDNKKYVIWAVTAAMLIRAASLIYQRPPAFVELRPSLWGGLTESDISILQRSSKK 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1647 555 Coils Coil 396 416 - -
Lele15g1647 555 SUPERFAMILY Nudix 354 516 IPR015797 -
Lele15g1647 555 CDD CoAse 84 239 IPR045121 GO:0010945
Lele15g1647 555 MobiDBLite consensus disorder prediction 123 141 - -
Lele15g1647 555 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 73 243 - -
Lele15g1647 555 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 340 521 - -
Lele15g1647 555 PANTHER NUDIX HYDROLASE 326 540 IPR045121 GO:0010945
Lele15g1647 555 FunFam Nudix hydrolase 11 66 243 - -
Lele15g1647 555 SUPERFAMILY Nudix 81 239 IPR015797 -
Lele15g1647 555 ProSiteProfiles Nudix hydrolase domain profile. 83 234 IPR000086 -
Lele15g1647 555 ProSiteProfiles Nudix hydrolase domain profile. 356 495 IPR000086 -
Lele15g1647 555 FunFam Nudix hydrolase 11 340 521 - -
Lele15g1647 555 MobiDBLite consensus disorder prediction 113 141 - -
Lele15g1647 555 CDD CoAse 357 517 IPR045121 GO:0010945
Lele15g1647 555 Pfam NUDIX domain 357 474 IPR000086 -
Lele15g1647 555 Pfam NUDIX domain 84 183 IPR000086 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1647 Lele-ChrLele15 9790924 9798202 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele15g1647 15 9790924 9798202 Lele15g1647 15 9790924 9798202 ECH
Lele13g0831 13 19997191 20003098 Lele15g1647 15 9790924 9798202 hybridization
Lele14g0723 14 18381620 18386936 Lele15g1647 15 9790924 9798202 hybridization