Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1645 ATGGTTCAAGTCTTAGAAACCACTCTCATCCTCCCTTCTCGTCCTCCCTTCACTGACGAACATGCCCTCTCTCTCTCTCACCTCGACACCGATCGCAACCTCCACCTCACTTTCCGATACCTTCGTGCTTACGTCAATACCCACCCCCCCTCTTCCGCCGACCCTTTTCTTGTCATCTCTTCCGCCCTCTCCCAAGCTCTCGTTCACTACTACCCACTCGCCGGAAAACTCCTCCGTCGCCAACAGGAAGACCAACGCCTCGAGATTTGGTGTTCCGCCAGCCAGGGAGTCCCTTTGATTCGGGCTAATGCGGATTTCACGCTTGAGTCCGTGAATTATCTCGATGATCCCGAGTCTCCTTTCCTCGAACAATTGGTCCCTGATCTGGACATGGACGGAGCGATGGAACACCCTTGTGTTCTGCAAATCACGGTGTTCAAGTGCGGTGCGTTCACTCTTGGAGCTGCGATACACCACTCCCTGTGCGACGGACTCGGCGCGACTCAGTTTTTCAGTGCGGCGGCCGAATTGGCCCGTGGAGCTACCCGAATAACGGTTGAGCCGATTTGGGACCGTGAGAAGCTGTTAGGTCCTCGGAATCCTACCCAAATTGATTCATCGGTTATCCGAGAGTTTCTGCATTTGGACAAGGAGTTCCTGCCGTACAAACGGAACATTGCCCCAGTTGTGAGAGCCTGCTTTCATGTGAGAGACGAGTGCTTGGAGAAGTTCAAGCGCTCGCTGCTTGAGCAATCTGGATTGAATTTCACCACTTTTGAGGCTTTGGGTGCATACGTTTGGAGATCCAAGGTTAGGGCCTCAGGGATTGAAGCAGATGAAAAGATAAAGTTTGCATACTCAATCAACATAAGGAAACTCGTGAAGCCACCGATTCCAGGAGGCTACTGGGGCAACGGTTGTGTCCCAATGTACGTGAAGATGAGGGCAAAGGATGTGATAGAGAAACCCATATGGGAAACAGCAGAGCAGATAAAGAAGAGCAAAAGCAATGTGAGTGACGAGTATGTGAGGTCGTTCATTGATTTTCAAGAGAGGCATTATAAGGATGGGGTCACAGCGGGAAAAGGAGTGATTGGGTTCACAGATTGGAGACATTTGGGACATTCGAGCGTGGATTTTGGGTGGGGAGGTCCTGTGACTGTGTTGCCTCTTGCAAGGAATCTGCTTGGAAGTATGGAGCCATGTTTTTTCTTGCCATATTCAACAGCAAGCTCAGAGAAGAAGGATGGGTTCAAGGTTTTGGTGACTTTGCCTGAAGCTGCATTGCCTGCTTTCAGAAAGGACATGGAATTGTTTTCCAATAGCCACGAAGTTGGACAGTCATCAATATAG 1353 0.5033 MVQVLETTLILPSRPPFTDEHALSLSHLDTDRNLHLTFRYLRAYVNTHPPSSADPFLVISSALSQALVHYYPLAGKLLRRQQEDQRLEIWCSASQGVPLIRANADFTLESVNYLDDPESPFLEQLVPDLDMDGAMEHPCVLQITVFKCGAFTLGAAIHHSLCDGLGATQFFSAAAELARGATRITVEPIWDREKLLGPRNPTQIDSSVIREFLHLDKEFLPYKRNIAPVVRACFHVRDECLEKFKRSLLEQSGLNFTTFEALGAYVWRSKVRASGIEADEKIKFAYSINIRKLVKPPIPGGYWGNGCVPMYVKMRAKDVIEKPIWETAEQIKKSKSNVSDEYVRSFIDFQERHYKDGVTAGKGVIGFTDWRHLGHSSVDFGWGGPVTVLPLARNLLGSMEPCFFLPYSTASSEKKDGFKVLVTLPEAALPAFRKDMELFSNSHEVGQSSI 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1645 450 Gene3D - 221 436 IPR023213 -
Lele15g1645 450 PANTHER ACYL TRANSFERASE 4 2 439 - -
Lele15g1645 450 Gene3D - 1 212 IPR023213 -
Lele15g1645 450 Pfam Transferase family 1 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1645 Lele-ChrLele15 9785086 9786804 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1645 39 390 Monolignol Biosynthesis Gene Families AT5G48930 29.570 6.32e-41 149
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele15g1645 15 9785086 9786804 Lele15g1645 15 9785086 9786804 ECH
Lele13g0832 13 20004569 20009059 Lele15g1645 15 9785086 9786804 hybridization
Lele14g0725 14 18390237 18391765 Lele15g1645 15 9785086 9786804 hybridization