Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1634 ATGTCGTCTACTCCTTCATCTTCTTCTAATCGGGTGCTGTCGTCCATAAAATTTCATGTCCTTGCTCACATCAAAAGGTTTATCAAACCCAAAGCGACCCGAGTAAGCTCTGATTCATCTGATCAACTCGACATATCAATTACCAAAGCCGACAGCAACATCGACAAGGTTGAGAATTGTGAATCAGAGACGCAAGCTATGGAGAAACAGAGTTGTAAGGAGGAGGAGGAGTCTATGATATCGTTGAAGAGGTGTGTGAAGAAGCTTCACTTCGGGAGCTGGGAAGAGAAGGAGATGACGGCGAAAGAGATTGAACGCTTAGCCAAAGAAGATGTCAGGGTAAGAAAGCTGATAACAGAGCTCGGAGTGGTGCCGGAGCTGGTGTCAATGGTGGCGTCGGAGGTGGCTGGCCTGCGGCTAGCAGGGTTAAAGGCGTTGGTCCAGCTTGCTCATGGAATTTACAAAAACAAGGCTTTAATAGTGGAGGCAGGTATATTCCCCAAGCTGCCAAAGAGATTTGACCTTGTAGATGAATCAACAAGAAGGGAATGTGCAGAGCTGCTCTTATCATTGTCATCTCTAGCAAACAGCCAATTCCCTATTGCTTCATCAGATTTTCTCCCATTCATTAAAGAGATTATGGAATCAGATTCAAATGTTGAAACCAAGCAATCATGCCTGGATGCCTTGTGCAACCTCTCAACTGCGTTAGAGAATGTAGGGCCTATAATTTCTGCTGGGATTGTGCCAATCCTCTTAGAACTGTCCTCCATTAAAGACAATTCAGAGAAAGCACTTGCTACTTTGGGGAGCTTGGTGGTGACCTTGATGGGGAAGAAGGCAATAGAAAATAGCTTAGTGATGCCAGAGAGCTGCATAGAGATTTTGACATGGGAGGATAAACCAAAATGCCAAGAATTGTCATCTTATATTCTGATGATTCTGGCTCATCAGAGCTCATCACAAAGACAGAAGATGGCAAAAGCAGGGATCGTCCCTGTTCTGCTTGAAGTGGCTCTCTTGGGAAGCCAATTAGCTCAGAAGAGAGCACTAAAGCTACTGCAATGGTTCAAGGACGAGAGGCAATTAAAGATGGGGCCACATTCTGGGCCACAAACACCAAGAATGGCAATGGGTTCACCTGTAAACCAAATGGAGGCAAAAGAGGGGAAAAGAATGATGAAGAGCTTGGTGAAACAGAGTTTGCATAGGAACATGGAAATTATTACCCAGAGAGCCAATGCCCCTGGGGATCCTTCTAAGTTGAAATCATTGGTCATCAGCACAAGTTCCAAGAGTTTGCCTTACTAA 1311 0.4493 MSSTPSSSSNRVLSSIKFHVLAHIKRFIKPKATRVSSDSSDQLDISITKADSNIDKVENCESETQAMEKQSCKEEEESMISLKRCVKKLHFGSWEEKEMTAKEIERLAKEDVRVRKLITELGVVPELVSMVASEVAGLRLAGLKALVQLAHGIYKNKALIVEAGIFPKLPKRFDLVDESTRRECAELLLSLSSLANSQFPIASSDFLPFIKEIMESDSNVETKQSCLDALCNLSTALENVGPIISAGIVPILLELSSIKDNSEKALATLGSLVVTLMGKKAIENSLVMPESCIEILTWEDKPKCQELSSYILMILAHQSSSQRQKMAKAGIVPVLLEVALLGSQLAQKRALKLLQWFKDERQLKMGPHSGPQTPRMAMGSPVNQMEAKEGKRMMKSLVKQSLHRNMEIITQRANAPGDPSKLKSLVISTSSKSLPY 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1634 436 Gene3D - 60 368 IPR011989 -
Lele15g1634 436 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 7 436 - -
Lele15g1634 436 MobiDBLite consensus disorder prediction 411 436 - -
Lele15g1634 436 SUPERFAMILY ARM repeat 83 357 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1634 Lele-ChrLele15 9706284 9708937 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1634 95 374 U-box Gene Family AT1G67530 28.920 5.06e-19 87.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele15g1634 15 9706284 9708937 Lele15g1634 15 9706284 9708937 ECH
Lele13g0845 13 20086366 20089020 Lele15g1634 15 9706284 9708937 hybridization
Lele14g0742 14 18474860 18477362 Lele15g1634 15 9706284 9708937 hybridization