Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1615 ATGGAAGACAATGTTCCTCTAGATCTTGGGAAGCTTGAATTACTCTCTAAACCACAATTGGTTGACAATCATACACCTCATCAGACAGCCGGAATTTGTTGCATGAATAGAAAACTTGGACACTGGTTCAAGCTACAGAACTACCATAATCATGAAGAGAACCGCTTTGACAATCAGCCTAGTGAGTCAGCAATTGCTCTAATGCATCGTAAATTACTTGATCAGTCCAGTAACCTTGCGGCTGTACCTTTTAGTGGTGGGTCTACAAAACAAATCATTAGTCTCCCAACTACACTGAGCAGTGGAGCTTTTCCAGCAACATTAAATACCAGTAAGAATCAAAATCAGTTACCTGCGCCATTACCTTCACCTGCTACTTCTGGAAGTGAAACAAATCAACAACCTTCAGCTAAAGATAAGGCTTCTGAAGTTGCTTGGAAGTACATAATTATTATATTAGGCGTGTTTGTGTTGGTCATTGTTGTTGTTGCCATATGTTGCCTGTGGAATAAGAGAGCAGTGAAAGTAATTAGGCCATGGAAGACAGGATTAAGTGGACAATTACAGAAAGCTTTTGTGACAGGTGTCCCTAAGCTAAATCGAGCAGAGTTGGAGGTAGCTTGTGAGGATTTCAGCAATATTGTTGTAAGCTTGCCTCATTGCACCATATATAAGGGAACCCTATCCAGTGGAGTTGAGATTGCTGTTGCATCAATTCTGGTAACTTCTGCACAAGAATGGTCAAAGAACATGGAGCTTGCCTATCGAAAAAAGATTGATTCCTTGTCTCAGATAAATCATAAGAACTTTATCAATCTTATTGGCTACTGTGAGGAAGAAGAGCCATTTACTAGGATGATGGTGACTGAGTATGCTCCAAATGGGACCCTATTTGAGCATTTGCATGTTGACGGGCTTGAACACCTTGATTGGAATGTGAGAATGAGGGTTATTATGGGCATGGCTTATTGTCTTCAGTACATGCACCATGACCTAAATCCACCAATAGCTCATGACGGCCTCAATTCACAATTAGTCTTGTTAACAGATGATTTTGCTGCAAAGATTTGCCAGTTCTTATTTACCCCATCAATTGAAGATAAATCAAATTCAAAGAATTCTGAACTGCCATTAAATGTTGATCCTGAGACGAACATTTATTGCTTTGGAAAATTGCTATTTGAAATCATTTCTGGGAAATTACCAGACTGTGAAGAACAAGGACAACTTGAGGAATTGGCTGCTGAATTTTCAAATGGTAAGAGAAGCATCAGTTATATGATCGATCCTTGCCTTGAATCCTTCAAAGAGAAAGAACTTGAAGTGGTTTGTGAGGTGATCCATGAATGTACCCAACCTAATCCAAGTTTGAGACCCACAATGAAGGACATAACCTCTAAATTAAGGGATGTTATTGGTATATCCCCTGACCAAGCAGCCCCAAGACTTTCTCCACTGTGGTGGGCTGAATTAGAGATCTTAAAGGTCAAGACCCTACCACATAGCTACAGCATATTAGACCCAGACCAGGCTTTAAATTATGGAAAGAAATCGTCTAAGCCTAGTAGTTTAGACCGTGCAAATGAGATTGTGGAGAGTCACGAAGAGTGTCAAGTGCATACAAAGAAACAAACCATGAGATATGCTGGTATGACCAGGGGATCTACAATAACCGCAAGAGCTTCGACATCTTCCACAATCGACCACAACGCTTTCCCTTCTGCTGTTGCTGCTACTGCTCGCCTCGTTTCTCAACCTCCCGGCCATTTCCAAGTCCTTCTTCGTAAGCTCAATTCTTCACCAGATTCTTCATATAAGGAAGGGAAGGTTCTGATGAAAAATCAATTACTTACGCTTGGCCAGCTTAGCAAGTTTCTGTGA 1881 0.4088 MEDNVPLDLGKLELLSKPQLVDNHTPHQTAGICCMNRKLGHWFKLQNYHNHEENRFDNQPSESAIALMHRKLLDQSSNLAAVPFSGGSTKQIISLPTTLSSGAFPATLNTSKNQNQLPAPLPSPATSGSETNQQPSAKDKASEVAWKYIIIILGVFVLVIVVVAICCLWNKRAVKVIRPWKTGLSGQLQKAFVTGVPKLNRAELEVACEDFSNIVVSLPHCTIYKGTLSSGVEIAVASILVTSAQEWSKNMELAYRKKIDSLSQINHKNFINLIGYCEEEEPFTRMMVTEYAPNGTLFEHLHVDGLEHLDWNVRMRVIMGMAYCLQYMHHDLNPPIAHDGLNSQLVLLTDDFAAKICQFLFTPSIEDKSNSKNSELPLNVDPETNIYCFGKLLFEIISGKLPDCEEQGQLEELAAEFSNGKRSISYMIDPCLESFKEKELEVVCEVIHECTQPNPSLRPTMKDITSKLRDVIGISPDQAAPRLSPLWWAELEILKVKTLPHSYSILDPDQALNYGKKSSKPSSLDRANEIVESHEECQVHTKKQTMRYAGMTRGSTITARASTSSTIDHNAFPSAVAATARLVSQPPGHFQVLLRKLNSSPDSSYKEGKVLMKNQLLTLGQLSKFL 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1615 626 MobiDBLite consensus disorder prediction 110 137 - -
Lele15g1615 626 SUPERFAMILY Protein kinase-like (PK-like) 221 467 IPR011009 -
Lele15g1615 626 ProSiteProfiles Protein kinase domain profile. 174 472 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele15g1615 626 Pfam Protein tyrosine and serine/threonine kinase 222 468 IPR001245 GO:0004672|GO:0006468
Lele15g1615 626 Gene3D Phosphorylase Kinase; domain 1 181 291 - -
Lele15g1615 626 PANTHER PROTEIN MALE DISCOVERER 2 4 496 - -
Lele15g1615 626 Gene3D Transferase(Phosphotransferase) domain 1 292 478 - -
Lele15g1615 626 FunFam Inactive receptor-like serine/threonine-protein kinase 183 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1615 Lele-ChrLele15 9589275 9596146 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1615 42 477 Receptor kinase-like Gene Family AT1G28440 24.893 1.72e-32 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Lele15g1615 PK_Tyr_Ser-Thr 1e-18 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele15g1615 15 9589275 9596146 Lele16g1645 16 9542608 9549558 ECH
Lele15g1615 15 9589275 9596146 Lele15g1615 15 9589275 9596146 ECH
Lele13g0862 13 20203973 20209121 Lele15g1615 15 9589275 9596146 hybridization
Lele14g0760 14 18594516 18599386 Lele15g1615 15 9589275 9596146 hybridization