Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1611 ATGGCCGACGCCGCTTCCAGCAAAGCCTCCACCAGCGGCGCCAACAAGAAGGTCGGCGGTAATACCCTCTTGTTGGGTCGCTTCGAAGTCGGCAAGCTTCTCGGTCATGGCACCTTCGCCAAGGTCTACCATGCTCGCAATGTAAAAACCGGCGAAGGGGTCGCCATCAAGGTCATTGACAAGGAGAAAATCCTCAAGAGCGGCCTCGTCGCTCACATCAAGCGCGAGATCTCCATCCTCCGACGAGTCCGACACCCCAACATCGTTCAGCTTTTCGAGGTCATGGCCACCAGGACCAAAATCTATTTCGTCATGGAATATGTTCGTGGGGGTGAGTTATTCAATAAAGTCGCTAAAGGGCGATTGAAAGAGGAAAGTGCCAGGAAATACTTTCAGCAATTGATTTCCTCTGTCGGTTTCTGCCACGCGAGAGGGGTATATCATAGGGATCTCAAGCCTGAAAACTTGTTGCTCGACGAAAATGGGGATCTCAAGGTGTCTGATTTTGGATTGAGCGCTGTCTCCGATCAAATTCGGCAAGATGGGTTGTTCCACACATTTTGTGGGACTCCTGCTTACGTTGCACCTGAGGTATTGGCTAGAAAAGGTTACGATGGGGCTAAGGTTGATGTTTGGGCTTGTGGGGTTGTTCTGTTTGTTTTGATGGCTGGTTACTTGCCTTTCCATGACCAGAATATCATGGCAATGTATAAGAAGATTTACAGGGGTGAGTTCAAATGTCCCAAGTGGTTTACCCCCGATCTCACTCGGCTTGTTACGCGTCTTCTTGATACCAACCCGCAAACCCGAATTTCCATTCCGGAGATCATGGAGAATCGGTGGTTCAAGAAAGGTTTCAAACAGATAAAGTTCTATGTGGAGGATGATAAACTTTGTAATATTGATGATAAGTTGGACAAGTTTGATGATATAGATGCAATGTCGGACTACTCCGTATCAGAATCTGATTCCGAGGTAGAGACTAGAAGAAGAAACGCTTCACTTCCAAGACCCGCTAGCTTGAATGCATTTGACATAATATCATTTTCTCCGGGTTTCGATCTCTCTGGGTTGTTTGAGGAGAAGGGGGATGAGGCGAGGTTTGTGTCTGGTGCACCAGTGTCAAAGATCATATCAAAGTTGGAGGAAATTGCCAGACTGGTCAGCTTCACTGTGAGGAAGAAAGATTGCAGAGTAAGCTTGGAGGGATCGAGAGAAGGAGCAAAGGGGCCATTGACAATTGCTGCAGAGATATTTGAATTAACACCTTCTTTGGTGGTGTTGGAGGTGAAGAAAAAAGCAGGGGATAAAGCAGAATATGATCAATTCTGTAACACTGAATTGAGACCTGGCTTGCAGAATTTGATGACAGAGGAGCCTGCAACTTCTTCTCAAACACCTAGTTCAGATACTGAACAGCCTAAACTACCTATGGATATTGATCCTCCACATTACATACCTTCAGATACCGAATAG 1476 0.4654 MADAASSKASTSGANKKVGGNTLLLGRFEVGKLLGHGTFAKVYHARNVKTGEGVAIKVIDKEKILKSGLVAHIKREISILRRVRHPNIVQLFEVMATRTKIYFVMEYVRGGELFNKVAKGRLKEESARKYFQQLISSVGFCHARGVYHRDLKPENLLLDENGDLKVSDFGLSAVSDQIRQDGLFHTFCGTPAYVAPEVLARKGYDGAKVDVWACGVVLFVLMAGYLPFHDQNIMAMYKKIYRGEFKCPKWFTPDLTRLVTRLLDTNPQTRISIPEIMENRWFKKGFKQIKFYVEDDKLCNIDDKLDKFDDIDAMSDYSVSESDSEVETRRRNASLPRPASLNAFDIISFSPGFDLSGLFEEKGDEARFVSGAPVSKIISKLEEIARLVSFTVRKKDCRVSLEGSREGAKGPLTIAAEIFELTPSLVVLEVKKKAGDKAEYDQFCNTELRPGLQNLMTEEPATSSQTPSSDTEQPKLPMDIDPPHYIPSDTE 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1611 491 CDD CIPK_C 342 453 - -
Lele15g1611 491 SMART serkin_6 28 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele15g1611 491 FunFam Non-specific serine/threonine protein kinase 338 456 - -
Lele15g1611 491 Gene3D Kinase associated domain 1, KA1 337 457 - -
Lele15g1611 491 MobiDBLite consensus disorder prediction 451 491 - -
Lele15g1611 491 Pfam Protein kinase domain 28 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele15g1611 491 SUPERFAMILY Protein kinase-like (PK-like) 24 283 IPR011009 -
Lele15g1611 491 ProSitePatterns Serine/Threonine protein kinases active-site signature. 146 158 IPR008271 GO:0004672|GO:0006468
Lele15g1611 491 FunFam Non-specific serine/threonine protein kinase 18 332 - -
Lele15g1611 491 FunFam Non-specific serine/threonine protein kinase 20 107 - -
Lele15g1611 491 Gene3D Transferase(Phosphotransferase) domain 1 21 336 - -
Lele15g1611 491 ProSiteProfiles NAF domain profile. 336 360 IPR018451 GO:0007165
Lele15g1611 491 ProSitePatterns Protein kinases ATP-binding region signature. 34 57 IPR017441 GO:0005524
Lele15g1611 491 MobiDBLite consensus disorder prediction 451 473 - -
Lele15g1611 491 ProSiteProfiles Protein kinase domain profile. 28 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele15g1611 491 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 21 452 - -
Lele15g1611 491 Pfam NAF domain 338 394 IPR004041 GO:0007165
Lele15g1611 491 CDD STKc_SnRK3 27 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1611 Lele-ChrLele15 9575695 9577170 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1611 11 491 CBL-interacting serine-threonine protein kinases AT4G18700 75.615 0.0 754
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lele15g1611 Pkinase 3.1e-73 CL0016