Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1610 ATGTATCCATCAGTCCCACCTTTGACAGCCCTCGACAGATTCTTATGGAGCCAGCACTCACAGAATCACAAGACTACTACTGGAGGATCAAGTTTCATTGATGGAAACAAAGTTATGGGGAAGCTTGATGATGATGTTGGAAGGAGACTTAATAAGAAAGGGTCTCGAGTGTCTTTGATCAAAGGACGGTGGACTGATGAAGAAGACAGGAAATTGGTAAGATTGGTGAATGAATATGGTGTGAAAAAATGGGCTGAAATTGCAGACAAATTGGATGGAAGAGCCGGCAAACAGTGTCGAGAGAGATGGCATAATCATTTGAGCCCTGATATTAAGTACTCTGAGAATTCTTCAACTTCCTACTTGTTGGACTTTTGTCAAGCAGATGGTGAGCAGCATCTTATCACTGACATGACTACTGGGCCTGGATTTGTGTATTCGTCCATTTCAAACCCAGATAACAGAATAAGCTTCTCTGAGGAAGCTGCCACTCCCATTAAACACCCCGAATCAGATCTTTATCTCTCTCACTTGCTCAATGGACCACCCTCCTCATCGCTTCTGTGCAGCTATCGAAATCAAAACCTGAACATGAATTTGCTCATGGGGTATCAAGACAATAGTTCAGAAGAAAAGCCAGAGATGGATTTGATGGAATTGGTTTCTTCAAAGTTTTCTACAAGCACCAACAGCAGCATTTGA 702 0.4245 MYPSVPPLTALDRFLWSQHSQNHKTTTGGSSFIDGNKVMGKLDDDVGRRLNKKGSRVSLIKGRWTDEEDRKLVRLVNEYGVKKWAEIADKLDGRAGKQCRERWHNHLSPDIKYSENSSTSYLLDFCQADGEQHLITDMTTGPGFVYSSISNPDNRISFSEEAATPIKHPESDLYLSHLLNGPPSSSLLCSYRNQNLNMNLLMGYQDNSSEEKPEMDLMELVSSKFSTSTNSSI 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1610 233 ProSiteProfiles Myb-like domain profile. 56 107 IPR001005 -
Lele15g1610 233 Gene3D - 60 112 - -
Lele15g1610 233 SUPERFAMILY Homeodomain-like 61 117 IPR009057 -
Lele15g1610 233 CDD SANT 63 107 IPR001005 -
Lele15g1610 233 FunFam Transcriptional activator Myb isoform A 60 112 - -
Lele15g1610 233 Pfam Myb-like DNA-binding domain 61 107 IPR001005 -
Lele15g1610 233 PANTHER MYB PROTEIN-RELATED 61 115 - -
Lele15g1610 233 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 56 111 IPR017930 -
Lele15g1610 233 SMART sant 60 109 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1610 Lele-ChrLele15 9568010 9569784 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1610 1 112 MYB Transcription Factor Family AT5G58850 40.397 4.76e-27 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele15g1610 Myb_DNA-binding 5.2e-17 CL0123