Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1609 ATGGGAGCTAAGGTTATAGATTCCTATTTTTGTAGATTGTGGATTCTTCTGGCGTTGTTTGCTATTGTGGATTCTTCCTGCGACAGCACCGACCATGAGTTGGTCTCCAAGGCCTTTCAATCTGTCTCTGGCTTCAATGTTTCCTGGTTCCATTCGCAGGGTTCAAACTGTTCAAAAGCTTCTCAGATTACTTCGATACAGCTTTCTTCCAGGAATCTGAGTGGGGCTATCTCTTGGGCTTTTATCAGGAACATGTCCAACTTGCAGGTTCTCGATCTTTCTGGGAATTTTCTCCAAGGCCAGGTACCTCGCTGGTTTTGGGCATCTCCCAGATTATCGAAAGTTGATCTTTCTAACAATAAGTTTGGAGGGAGCATTGACCTCGAATATTCCCCCACAGGAAACTCTTCGTTTTCATCGCTTCAAAATCTCAATCTCTCTCACAACAGGTTCACCAATCTGCTTCAACTCTCTTGGTTCTCCAACCTCAAAATTCTCGACCTCTCGCATAACAACTTGAGGACTCTCCCTTCTGTGCTTCAAAACCTCCCCGGATTACACCATCTCGATCTCTCGAGCTGCAATATCAAAGCAAACGTAAAACCTATTTCTGCCCTGCGCTCGCTGAATTACTTGGACTTGTCAAACAACGCTTTCCATGGTAGTTTCCCTTCCGATTTCCCGCCTCTGCAAAAGCTCATGTTCCTCAACATTTCTTACAACAACTTCACAGCACTGGTTCACTTAGATGGGTACAAGAAATTTGGCGACTCAGCTTTCATTGACGCCGGAAACAACTTCTCTCACAGTACATCTAAATCTAATACCCCAAGTCTTGATCCACCTTCTCCTCATGCTTTAAAAGCCTCGACGACGCGCCACCACAAACACAAGCACAAAACTCTGGTGGTGGCGGTGTCCTCTGCTTCAGCATTTGTGCTGGTTCTATTGAGTATATGGGTGTTTTGTATTTACAGAAAGAAGAGACGACTGGCGAAGAAAATAAAATGGGCAATCTCGAAGCCGGTGCCTTTGGGAATAAAGTTGGACAAATCGGGGCCTTTCGAGTTCGAAACGGAGTCAGGAAGCTCGTGGGTGGCGGATTTGAAGGAGCCATCGTCGGCACCGGTGGTAATGTTCGAGAAGCCATTGATGAACCTGAGCTTCAAGGACCTGATCGCAGCCACGTCACACTTCGGCAAAGAGTCGCTGCTGGCGGAGGGAAGGTGCGGGCCCGTGTACAGAGCCGTCGTCGTCCCCGGTGACATCCACGTGGCAATCAAGGTCCTGGAGAATGCAAGAGACGTCGATAGTGATGACGCCATCGCGCTGTTCGTTGACCTGTCTAAGCTCAAACACCCCAATTTATTGCCACCCTCCGGCTACTGCATTGCAGGCAGTGAGAAGCTGATTTTGTACGAGTTCATGTCAAACGGCGATTTGGGTAGGTGGCTACATGAGCTGCCAACGGGGCAAACTAACGTGGAGGATTGGACCGGTGACACGTGGGAGATTCAAAACGGCTCCGGATCTCAGGTCCCATCCCCGCCGGAGAAGATGAATTGGCTAACACGACACCGTATTTCCATCGGGATTGCGCGTGGACTAGCGTATCTTCACCACGCAGGGTCAAAGGCAGTCGTCCACGGTCACCTAGTGACTTCAAATATCTTGCTCGCCGATGACTTGGAGCCCAGGATCGCCGATTTTGGGATTCGAAACATCGGGAAGGAACAACGGAGCCCGAATTGCAGCACAGAGACGGACGCATACTGCTTCGGGGTGGTGCTGATGGAGCTGTTAACGGGTAAGCCCGGCACAGCGGAGACGGTGGTTCGGGTGAGAAAGGCGGTGAGGGAGGGGCAGGGGGAGCGCGAGTTGGACGAGAGGCTAACCCTAAGCTGCGACTGGGAAAGCGAGATGCTCGAGAGCCTGCGAGTCGCGTACTTGTGCACGGCCGAGTCACCGGGCAAAAGGCCCACCATGCAGCAGGTCCTGGGTTTGCTAAAAGACGTCCACCCGCACGACCCGAGTTGA 2037 0.5106 MGAKVIDSYFCRLWILLALFAIVDSSCDSTDHELVSKAFQSVSGFNVSWFHSQGSNCSKASQITSIQLSSRNLSGAISWAFIRNMSNLQVLDLSGNFLQGQVPRWFWASPRLSKVDLSNNKFGGSIDLEYSPTGNSSFSSLQNLNLSHNRFTNLLQLSWFSNLKILDLSHNNLRTLPSVLQNLPGLHHLDLSSCNIKANVKPISALRSLNYLDLSNNAFHGSFPSDFPPLQKLMFLNISYNNFTALVHLDGYKKFGDSAFIDAGNNFSHSTSKSNTPSLDPPSPHALKASTTRHHKHKHKTLVVAVSSASAFVLVLLSIWVFCIYRKKRRLAKKIKWAISKPVPLGIKLDKSGPFEFETESGSSWVADLKEPSSAPVVMFEKPLMNLSFKDLIAATSHFGKESLLAEGRCGPVYRAVVVPGDIHVAIKVLENARDVDSDDAIALFVDLSKLKHPNLLPPSGYCIAGSEKLILYEFMSNGDLGRWLHELPTGQTNVEDWTGDTWEIQNGSGSQVPSPPEKMNWLTRHRISIGIARGLAYLHHAGSKAVVHGHLVTSNILLADDLEPRIADFGIRNIGKEQRSPNCSTETDAYCFGVVLMELLTGKPGTAETVVRVRKAVREGQGERELDERLTLSCDWESEMLESLRVAYLCTAESPGKRPTMQQVLGLLKDVHPHDPS 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1609 678 ProSiteProfiles Leucine-rich repeat profile. 140 161 IPR001611 GO:0005515
Lele15g1609 678 SMART LRR_typ_2 160 182 IPR003591 -
Lele15g1609 678 SMART LRR_typ_2 85 108 IPR003591 -
Lele15g1609 678 SMART LRR_typ_2 206 229 IPR003591 -
Lele15g1609 678 SMART LRR_typ_2 230 253 IPR003591 -
Lele15g1609 678 Gene3D Phosphorylase Kinase; domain 1 359 475 - -
Lele15g1609 678 FunFam Putative LRR receptor-like serine/threonine-protein kinase 360 475 - -
Lele15g1609 678 MobiDBLite consensus disorder prediction 271 292 - -
Lele15g1609 678 FunFam Calmodulin-binding receptor kinase CaMRLK 156 249 - -
Lele15g1609 678 Pfam Protein tyrosine and serine/threonine kinase 403 574 IPR001245 GO:0004672|GO:0006468
Lele15g1609 678 SUPERFAMILY L domain-like 46 246 - -
Lele15g1609 678 Gene3D Ribonuclease Inhibitor 134 260 IPR032675 -
Lele15g1609 678 SUPERFAMILY Protein kinase-like (PK-like) 389 671 IPR011009 -
Lele15g1609 678 ProSiteProfiles Leucine-rich repeat profile. 162 184 IPR001611 GO:0005515
Lele15g1609 678 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 45 670 - -
Lele15g1609 678 PRINTS Leucine-rich repeat signature 163 176 - -
Lele15g1609 678 PRINTS Leucine-rich repeat signature 206 219 - -
Lele15g1609 678 Gene3D Ribonuclease Inhibitor 30 133 IPR032675 -
Lele15g1609 678 Pfam Leucine rich repeat 140 196 IPR001611 GO:0005515
Lele15g1609 678 Pfam Leucine rich repeat 62 122 IPR001611 GO:0005515
Lele15g1609 678 Gene3D Transferase(Phosphotransferase) domain 1 476 676 - -
Lele15g1609 678 ProSiteProfiles Protein kinase domain profile. 399 676 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1609 Lele-ChrLele15 9562808 9565303 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1609 63 672 Receptor kinase-like Gene Family AT5G07280 30.168 5.19e-69 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-2 Lele15g1609 PK_Tyr_Ser-Thr 7.3e-20 CL0016