Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1603 ATGGCGGCAATTGATCCATCAGTCTCCAAAATACCTTTTGAATCCCTAAACGCTTTGTGGTGGATCTGTATTTTCCTCAGGCGTATAGCCCTCTACCTTTACCTTCCTTTGCTAGTTTCTTTGTATACGTCTACGTCTCTCATAGTATGTTGGTCGGAGCCGAATGGTCAAATAGCCTGTTGTCAGGGGAAGCTCGAACCCTTAGCTGGAAGGAGGGTCCCAGATGTAAAGGATCTTAATGTTAATATGTGGCTGACTTGTAATGATGCAAACATGTCCCTTGTGAAATGTAATGCTATCTGTTTTTTTTTTAATGCTGCATCTTTATTTATGCCGTTGCCAAATGCTGACTATTCTTCTGGCACAGGAAATTCCAAAGGGGGTTGGTTGCTTTTTGACGCAAAGCAAAGCAGAGTAACTAGAAGCTCAGCAGTGAAGATCCCAGTTAAAAGTTTCACACTTTTCGGGTCTCTGCTTGATTTGATTTCTTGTTTCATGGAAGATGTGAAAAGAGCTGTTTGGTTCGTCTTCTTTCTGTGGATTTGGTTGGGTGCTGCTGGTAACACTGACAGTCTTCTTTCTCCAAAGGGTGTGAACTATGAAGTTGCTGCTTTGATGTCAATGAAGAATAAAATGAAAGACGAATTGCGTGTTATGGATGGTTGGGATATTTATTCGGTTGATCCTTGTACTTGGAACATGGTCGGTTGCTCTGCTGAGGGCTATGTTATTTCCCTGGACATGGCCAGTATGGGTTTATCTGGAACGCTTTCTCCAGGAATTGGAAATTTGAGCCACCTCCGAACACTGTTGTTGCAGAACAATCAATTATCTGGACCTGTTCCTGCTGAGATAGGAAAGCTTTTGGAGCTTCAGACTCTTGACCTTTCTGGTAACCAGTTTGTTGGTGAAATCCCTAGTTCTCTGGGAATTTTGACTCGTCTTAGTTACTTGCGGCTTAGTAGAAATAAACTATCTGGGCAGATTCCTCAACTTGTTGCAAATCTCACAGGCCTTTCATTCTTGGACTTGTCATTCAATAATCTCAGTGGTTCCATTCCAAAAATTTTAGCAAAAGGTTACAGTATTTCAGGAAACAACTTCCTTTGTGCGTCTTCATCAGCACAAATTTGTATGGGTGTTTCAAATCCACTAAATGACACTGGTTCCTCACTGGAAGTTGGTAGTCATCACCATCGGGTGCTTTCGGTTGCTATTGGCATTACTTGTACATTTCTAATTTCGGTAATGCTGCTTATCTGCTGTGTGCATTGGTACAGATCACGCATCCTGTATACATCTTATGTAAAGGAAGATTATGAATTTGACATTGGTCATTTGAGGAGGTTTTCTTTCCGTGAATTGCAATCTGCTACTAGCAATTTCAGTCCAAAAAACATCCTAGGACAAGGTGGATTTGGTGTTGTGTACAAAGGATGTCTTCCAAATAAAATGACGGTGGCGGTGAAGAGGCTGAAAGATCCCAATTACACTGGAGAAGTACAATTTCAAACTGAAGTTGAGATGATTGGCTTGGCAGTTCATCGGAATCTCTTACGTCTCTATGGATTTTGTATGACATCTGATGAGAGGCTACTTGTTTACCCATACATGCCTAATGGCAGTGTTGCTGATCGCTTAAGAGACACTTGTCGCGAAAAGCCGTCATTGGACTGGAATAGGCGAATGCGAATTGCTCTTGGGGCAGCTCGCGGGCTTCTATATTTACATGAGCAGTGTAACCCAAGAATTATCCACAGGGACGTTAAGGCTGCAAACATTTTGCTAGATGAAAGTTTTGAAGCTGTGGTGGGGGATTTTGGTCTTGCTAAGCTCTTGGATCAAAGAGATTCTCATGTCACTACTGCAGTGAGAGGCACAGTAGGACACATTGCCCCTGAATATCTCTCCACTGGGCAGTCTTCTGAAAAAACTGATGTTTTCGGATTTGGCATATTACTTTTGGAGCTCATCACAGGGCAGAAGGCTTTGGATGCTAGAAATGGTCAAATCCAGAAGGGAATGATTCTTGATTGGGTCAAAACCTTATTTGAGGAGAAGAGATTGGAGGTGCTAGTTGATAGGGATCTGAGGGGACGATTTGATCCAATAGAGTTGGAACAAGCAGTGAAGTTGTCTTTACAATGTACTCAATCACATCCCAGTCTCCGGCCAAAGATGTCGGAAATCTTGAGGATCCTAGAAGGCCTGGTCGGACAGGGGCAGCCAGAGGAGGAGTCACCCGGTGGAGGTAACCTTTATGACGAAAGAAATTGCAGTTTCTCCAGAAATTACAGTGATGGGCATGATGAACCTTCATTCATTATTGAAGCCATCGAGCTTTCTGGACCTCGGTGA 2358 0.4292 MAAIDPSVSKIPFESLNALWWICIFLRRIALYLYLPLLVSLYTSTSLIVCWSEPNGQIACCQGKLEPLAGRRVPDVKDLNVNMWLTCNDANMSLVKCNAICFFFNAASLFMPLPNADYSSGTGNSKGGWLLFDAKQSRVTRSSAVKIPVKSFTLFGSLLDLISCFMEDVKRAVWFVFFLWIWLGAAGNTDSLLSPKGVNYEVAALMSMKNKMKDELRVMDGWDIYSVDPCTWNMVGCSAEGYVISLDMASMGLSGTLSPGIGNLSHLRTLLLQNNQLSGPVPAEIGKLLELQTLDLSGNQFVGEIPSSLGILTRLSYLRLSRNKLSGQIPQLVANLTGLSFLDLSFNNLSGSIPKILAKGYSISGNNFLCASSSAQICMGVSNPLNDTGSSLEVGSHHHRVLSVAIGITCTFLISVMLLICCVHWYRSRILYTSYVKEDYEFDIGHLRRFSFRELQSATSNFSPKNILGQGGFGVVYKGCLPNKMTVAVKRLKDPNYTGEVQFQTEVEMIGLAVHRNLLRLYGFCMTSDERLLVYPYMPNGSVADRLRDTCREKPSLDWNRRMRIALGAARGLLYLHEQCNPRIIHRDVKAANILLDESFEAVVGDFGLAKLLDQRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQKALDARNGQIQKGMILDWVKTLFEEKRLEVLVDRDLRGRFDPIELEQAVKLSLQCTQSHPSLRPKMSEILRILEGLVGQGQPEEESPGGGNLYDERNCSFSRNYSDGHDEPSFIIEAIELSGPR 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1603 785 Gene3D Ribonuclease Inhibitor 198 380 IPR032675 -
Lele15g1603 785 SUPERFAMILY L domain-like 200 368 - -
Lele15g1603 785 FunFam Putative LRR receptor-like serine/threonine-protein kinase 198 380 - -
Lele15g1603 785 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 173 733 - -
Lele15g1603 785 Pfam Leucine rich repeat N-terminal domain 199 238 IPR013210 -
Lele15g1603 785 Pfam Protein kinase domain 465 731 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele15g1603 785 SMART serkin_6 462 733 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele15g1603 785 FunFam Somatic embryogenesis receptor kinase 1 432 537 - -
Lele15g1603 785 ProSitePatterns Protein kinases ATP-binding region signature. 468 490 IPR017441 GO:0005524
Lele15g1603 785 SUPERFAMILY Protein kinase-like (PK-like) 446 736 IPR011009 -
Lele15g1603 785 ProSitePatterns Serine/Threonine protein kinases active-site signature. 584 596 IPR008271 GO:0004672|GO:0006468
Lele15g1603 785 ProSiteProfiles Protein kinase domain profile. 462 738 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele15g1603 785 Gene3D Phosphorylase Kinase; domain 1 432 537 - -
Lele15g1603 785 Gene3D Transferase(Phosphotransferase) domain 1 538 741 - -
Lele15g1603 785 FunFam Somatic embryogenesis receptor-like kinase 1 538 746 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1603 Lele-ChrLele15 9503341 9508471 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1603 206 785 Receptor kinase-like Gene Family AT5G45780 72.289 0.0 838
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Lele15g1603 Pkinase 1.1e-44 CL0016