Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1581 ATGGTGGACGATCCTTCAACAAATTCGATTATTTCTTGGAGTGCCACTAACAAAAATTTCATAGTGTGGAATCCACCTGAATTTACAAGGGTGTTGCTACGAAGATTCTTTAAGCACAATAACTTCTCTAGTTTCATCAGACAGCTGAACACATATGTAAGCAAATTTAATCTTGATATTGGTGATGCCACTGGTTTTAGAAAAGTTGATTCAGAACAATGGGAATTTGCAAATGATGATTTCATAAGAGCTGTACTTGAAGATGCTACAGAATCTTCCTCGATGATACCTCGAGATAATGCTGATATAACTTCTGTTCTGTCATCAAATGTGGAGCGACTGGAACAGTTGGAATCATTGCTGTTATTATGGGAGAACGTTGCTCATGATTTTAGTGATTCCTTTGTTCATAGCCATTCAAATATGGGTCTTGATGAATCTACAAGTTGTGCTGATAGTCATGCTCTCTTTTGTATGCAACTTGATGATGAAGTTTACCCTATGTCATCTGGAATTGACATGAACTCTGAGCCAGATGGAGCTACTGTTGTTGATCCTGGTTTATCAAAAGAAAAACCTTTGGGAACAACCACTTTAGCAGCTGGTGTCAATGATGTATTCTGGGAACAGTTCTTGACAGAGAATCCTGGTTCTTCAGAAACATAG 666 0.3799 MVDDPSTNSIISWSATNKNFIVWNPPEFTRVLLRRFFKHNNFSSFIRQLNTYVSKFNLDIGDATGFRKVDSEQWEFANDDFIRAVLEDATESSSMIPRDNADITSVLSSNVERLEQLESLLLLWENVAHDFSDSFVHSHSNMGLDESTSCADSHALFCMQLDDEVYPMSSGIDMNSEPDGATVVDPGLSKEKPLGTTTLAAGVNDVFWEQFLTENPGSSET 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1581 221 SUPERFAMILY "Winged helix" DNA-binding domain 1 84 IPR036390 -
Lele15g1581 221 SMART hsfneu3 1 99 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele15g1581 221 Pfam HSF-type DNA-binding 1 84 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele15g1581 221 FunFam Heat stress transcription factor B-4 1 91 - -
Lele15g1581 221 Gene3D - 1 94 IPR036388 -
Lele15g1581 221 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 1 84 IPR027725 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1581 Lele-ChrLele15 9373033 9374157 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1581 1 84 HSF AT4G17750 59.524 4.81e-30 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Lele15g1581 HSF_DNA-bind 3.1e-20 CL0123