Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1571 ATGATCGACCTGGGGCCCATGACAGCCACAGGGACAAGCTCTGACCAGTACAAGATGTACGAGAATAAATATACCAATCCAATGTTATCTTTAGACAGCGTTCATGACCGTTCATCTCTGCGATCGAAAAATCCAACGAGTGAATTTATCAAGGTTTGGTGTTTAATGAAATCGAAAAACCCAGCCAGGCTGATGTGTTTGGCCATTGAAGGCGATCTGGATGGTATTCGTGAGCTAACAAATAAGGGGGTTAACAGAGATATTGATAATCGCACGCCTCTTCATGTTGCTGCCTGTCAGGGATTGACTGATGTGGTTGCTCTGTTGCTCGAAAAAGGGGCTGTGGTTGACCCACAAGATCGTTGGAGGAGCATGCCTCTTGCAGATGCTATACATTGTAAAAACAGCGATGTCATCAAATTATTGGAGAAGCATGGAGCAAAGCCTCTGATGGCCCCTATGCATGTTAACCATGCACAGGAAGTACCAGAATATGAACTTGATCCTAAGGAGCTTGATTTTACCAACAGTGTGGAGATAAGTAAGGGAACTTTCTGTAGTGCATTGTGGCGTGGAACAGAGTTTGCTGTGAAAAAGCTTGAAAAGTTTTCTTAGGGAATGAACTATTTGCATGAAAATAAGCCATCGCCAATGATTCATCGTGATCTTGACCCCTCTAATATATTGCGGGATGATTCAGTACACCTAAAAGTTGCAGACTTTGGGGTCAGCAAATTGCTGGCAGTTAAAGAAGACAGGCCTCTAACCTCCCAAGAGACTTCTAGCCGCTATGTGGCTCCAGAGGTTTTCGATCAAGAAGAGTATGACACCAAAATGATGTTTTCTCATTTGCTTCGATTCTGCAAGAGAGCTGATACCATGGGTTTTCCCCCTGAGGGCTGCCCCCCATTTTTTACAAAGCAAGATGATGAGGTTCCCAAGGTATATGCTGCAAAAGAGCCTCCTCCTTTCAGCGCTCCAGCCAAGCGTTATGCCCATGGATTGAGAGTGTTAGGCACTGATGAAACGCTTCCAGAATCTGGAAGCCTTGTTGAAGAGAGATCACTCACATCTAAGCAGTCCCAGCGGCTAATCTCGTTCTACAGCCAGCAGTTTATGAATGAAGCAGAAGAAGGTAGATTGGTTCCTCACTTTAACTTGAAAATATTGGTATGGGAATGGGACTTTCATTGA 1194 0.4447 MIDLGPMTATGTSSDQYKMYENKYTNPMLSLDSVHDRSSLRSKNPTSEFIKVWCLMKSKNPARLMCLAIEGDLDGIRELTNKGVNRDIDNRTPLHVAACQGLTDVVALLLEKGAVVDPQDRWRSMPLADAIHCKNSDVIKLLEKHGAKPLMAPMHVNHAQEVPEYELDPKELDFTNSVEISKGTFCSALWRGTEFAVKKLEKFSXGMNYLHENKPSPMIHRDLDPSNILRDDSVHLKVADFGVSKLLAVKEDRPLTSQETSSRYVAPEVFDQEEYDTKMMFSHLLRFCKRADTMGFPPEGCPPFFTKQDDEVPKVYAAKEPPPFSAPAKRYAHGLRVLGTDETLPESGSLVEERSLTSKQSQRLISFYSQQFMNEAEEGRLVPHFNLKILVWEWDFH 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1571 397 ProSiteProfiles Protein kinase domain profile. 2 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele15g1571 397 ProSiteProfiles Ankyrin repeat profile. 89 121 IPR002110 GO:0005515
Lele15g1571 397 Gene3D - 55 196 IPR036770 -
Lele15g1571 397 SMART ANK_2a 89 118 IPR002110 GO:0005515
Lele15g1571 397 SMART ANK_2a 59 88 IPR002110 GO:0005515
Lele15g1571 397 SMART ANK_2a 122 151 IPR002110 GO:0005515
Lele15g1571 397 Gene3D Transferase(Phosphotransferase) domain 1 197 282 - -
Lele15g1571 397 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 205 338 - -
Lele15g1571 397 SUPERFAMILY Protein kinase-like (PK-like) 204 278 IPR011009 -
Lele15g1571 397 Pfam Ankyrin repeats (3 copies) 65 149 IPR002110 GO:0005515
Lele15g1571 397 ProSiteProfiles Ankyrin repeat region circular profile. 89 121 - -
Lele15g1571 397 Pfam Protein kinase domain 201 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele15g1571 397 SUPERFAMILY Ankyrin repeat 63 151 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1571 Lele-ChrLele15 9319389 9324307 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1571 196 338 MAP Kinase Kinase Kinase AT4G18950 55.245 3.13e-41 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Lele15g1571 Pkinase 8.9e-17 CL0016