Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1553 ATGGCAGAAGGATCATCGACAGATTCATCGGCGGGCAAACAGAAAGTTCCCTTTCACAAGCTCTTTACTTTGGCCGACCGTCGTGACGTGGTCTTGATGGCCGTCGGTACGATCTGGGCGTGGGCCAATGGGTTATCACAGCCACTCATGACCGTGATTTTCGGGAAGCTCATCAACACTTTTGGTTCGACTGATCAATCACGCATTGTGCATGAAGTTTCTAAGGTTTCATTACTCTTCGTATACCTGGCTATTAGTTCTGGCGTTGCTTCATGTCTCCCGTTGGCTAGTTGGATGGTGACAGGAGAAAGGCAAGCCGCAAGGATCCGTGGTTTGTACTTGAAAACAATATTAAGACATGACATTGGCTTCTTCGACACTGAAACAACCACAGGGGAGGTCATTGGTAGGATGTCTGGTGATACCATTCTCATTCAAGATGCCATGGGAGAAAAGGTTGGGAAGTTTATGCAACTTGCTTCAACTTTTGTTGGTCGTTTTGTGGTTGCTTTTACAAGGGGATGGCTACTTGCTCTGGTTTTGCTTTCATGTGATCCATTGGTTGTCATAGCTGGTGGAATCGCGTCAATGTTTGTGGCAAAAATGGCAAGTCGTGGACAATTTGCTTATGCTGAAGTAGGAGATGTGGTTGAACAAACTGTTGGAGCCATTAGAACAGTTGCATCTTTCACTGGGGAGAAGAAAGCAGTAGAAAACTATAATAGAAAGTTGAAAGTTGCCTATAAAAGAATGGTTAAACAAGGGATGACCACTGGGCTTGGATTTAGAGTTATTTTGCTCATAATGTTCAGCACCTATGGACTTGCAATCTGTTATGGAGCCAAACTGATCCATTATAGAGGGTACAACGTTGGAGCTGTCATCACTATAATAATGGCGCTTATGACAGGTGGAATATACCCTGCAAGGCCAGACGTACAGGTTTTTGCTGGATTCTCACTGTATGTTCCAAGTGGCACAACTACTGCTTTATTGGGAACTCATTATGAGTTAATCCAAAATCCTGATGGTGCTTATTCTCAGCTTGTTCGTCTACAAGAAGGTCCTGGTGAAGCTGAAGATGGAAAAAAAAATCTGAAACAGATAAGGCCACTACCAGTCTATAGACAGAAACATGGCTTCATCTGA 1149 0.4386 MAEGSSTDSSAGKQKVPFHKLFTLADRRDVVLMAVGTIWAWANGLSQPLMTVIFGKLINTFGSTDQSRIVHEVSKVSLLFVYLAISSGVASCLPLASWMVTGERQAARIRGLYLKTILRHDIGFFDTETTTGEVIGRMSGDTILIQDAMGEKVGKFMQLASTFVGRFVVAFTRGWLLALVLLSCDPLVVIAGGIASMFVAKMASRGQFAYAEVGDVVEQTVGAIRTVASFTGEKKAVENYNRKLKVAYKRMVKQGMTTGLGFRVILLIMFSTYGLAICYGAKLIHYRGYNVGAVITIIMALMTGGIYPARPDVQVFAGFSLYVPSGTTTALLGTHYELIQNPDGAYSQLVRLQEGPGEAEDGKKNLKQIRPLPVYRQKHGFI 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1553 382 SUPERFAMILY ABC transporter transmembrane region 20 303 IPR036640 GO:0005524|GO:0016020
Lele15g1553 382 Gene3D ABC transporter type 1, transmembrane domain 25 369 IPR036640 GO:0005524|GO:0016020
Lele15g1553 382 CDD ABC_6TM_Pgp_ABCB1_D1_like 33 305 - -
Lele15g1553 382 Pfam ABC transporter transmembrane region 35 302 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele15g1553 382 PANTHER ABC TRANSPORTER B FAMILY 9 305 - -
Lele15g1553 382 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 34 302 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1553 Lele-ChrLele15 9200914 9204151 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1553 16 306 Calmodulin-binding Proteins AT2G36910 37.543 3.52e-62 214