Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1552 ATGTATCCTTCGGGAGAAGGAGTTGATGAACTTGGAAAAACCAAATCTGCTAATGTCAAGCGACAAGAGGTTTCTCTTATGCGTTTGGCCTATTTGAACAAACCTGAGATTCTCGTGATATTGGTTGGAACTGTTGCTGCTGTAATACAAGGCGTAATTTTACCTATATTTGGCCTCTTACTTTCATCAGCTATTAGAGTGTTATATAAACCACCAGAGCAAATGAGGAAAGAATCCAAGTTTTGGGGACTTCTTTATGTGATTTTGGGTTTAGTTTCTTTGATTTCCCTACCATTACAAAATTACTTCTTTGGAATTGCTGGTGGAAAATTGATGGAACGAATTCGTTCTTTGACATTGGAGAAGGTTGCGCACCAAGAAATAAGTTGGTTTGATGATCCTGCAAATTCAAGTGGCACAGTTGGTGCGAGGTTATCTACAGATGCTTCATCAGTGAGAGGTCTTGTTGGTGACATCTTGGCCCTGATTGTGCAGAACATAACAACACTGATGTATGAAGAGGCCAGTCAGGTGGCAAATGATGCGGTTGGTAGCATAAGAACTGTTGCATCATTCTGTGCTGAACCTAAGGTCATGGAAATGTATGGGAATAAATGTGAAGGGCCAGAAAAACAAGGCATTCGACTAGGTCTCGTTAGTGGTGCAGGTTATGGCTTCTCTTTCTTTGCTTTATACTGCACAAATGCTCTGTGTTTCTACGTTGACTCCACAGCTTCAATATTTGAAATTCTGGAAGGTAAACCCAACATTGACTCTAGTAGCGATGAGGGCGTGACATTAGATTCGCCCCCAATCATGCCATCAGCTTCGAAATGGAGAAAAGCTGCCAAGAAAAAGAAGGTAAAGGAGGCTAATATCAACCCCTCAAGTGATGGGCAGCAAGAAATGTTAGGAAGTGATGACTTGAAGTCCCAAGATGAGAGAGGAAGCGATGCTGGTGAGGTTAGTGATTTTGAGAGCGTTGGATTGGTTAAAACAAAGGAGAATACTGAAGAATCAAATCATGGGAATAAAAGTGCCGATGCTACTTCAACCTACGGATCCCCATCTGAGAAGGACTCGGATTTTAAATCCTGTAATTCAATACTAGAGCCAACAACATCTGAGTATTTGGGTAAATACTCTGATCCTGCACCAGCACAAATGACTTTGGTTACTGAAAATACACCATATAAGGAGACCGATAACTCAGTTAAGCCAGAGAGTTCTGTGCCTAAGGAGAAAAGCAGTGTTACTGAAAGTTCCTTGCTAGGGAAGTCACCAGTTGCTAAAGTAGGAGCAGCAGATCTTGGTATGAAAAGAAATGATGATAAAGTAGGTCCCTTCTCTGATGAAAATGCTAGAGTGTTAAGTTGGGAGGTACCTAAACAAAAGGAATATGATAGTAATTTACCAAATTCATCATATGGTAGCCCTATCCCTGAATCTTCTAATGCTATAGAACATGCCAAAGATTCTGAAATTCCAGAATGCTCTGAAGATCAGACCCTAGTGGCATCAGGTCCCCCAGTGCAGAAGACCTCCTGGTTGAATTGCTGTGGATTGTTCGAAGTGCTAGGCTCCAGCAGATAA 1593 0.4156 MYPSGEGVDELGKTKSANVKRQEVSLMRLAYLNKPEILVILVGTVAAVIQGVILPIFGLLLSSAIRVLYKPPEQMRKESKFWGLLYVILGLVSLISLPLQNYFFGIAGGKLMERIRSLTLEKVAHQEISWFDDPANSSGTVGARLSTDASSVRGLVGDILALIVQNITTLMYEEASQVANDAVGSIRTVASFCAEPKVMEMYGNKCEGPEKQGIRLGLVSGAGYGFSFFALYCTNALCFYVDSTASIFEILEGKPNIDSSSDEGVTLDSPPIMPSASKWRKAAKKKKVKEANINPSSDGQQEMLGSDDLKSQDERGSDAGEVSDFESVGLVKTKENTEESNHGNKSADATSTYGSPSEKDSDFKSCNSILEPTTSEYLGKYSDPAPAQMTLVTENTPYKETDNSVKPESSVPKEKSSVTESSLLGKSPVAKVGAADLGMKRNDDKVGPFSDENARVLSWEVPKQKEYDSNLPNSSYGSPIPESSNAIEHAKDSEIPECSEDQTLVASGPPVQKTSWLNCCGLFEVLGSSR 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1552 530 Pfam ABC transporter transmembrane region 41 170 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele15g1552 530 Pfam ABC transporter transmembrane region 172 241 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele15g1552 530 MobiDBLite consensus disorder prediction 259 368 - -
Lele15g1552 530 Gene3D ABC transporter type 1, transmembrane domain 4 262 IPR036640 GO:0005524|GO:0016020
Lele15g1552 530 MobiDBLite consensus disorder prediction 307 321 - -
Lele15g1552 530 MobiDBLite consensus disorder prediction 389 424 - -
Lele15g1552 530 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 172 241 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele15g1552 530 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 54 171 IPR039421 -
Lele15g1552 530 MobiDBLite consensus disorder prediction 389 512 - -
Lele15g1552 530 MobiDBLite consensus disorder prediction 467 482 - -
Lele15g1552 530 MobiDBLite consensus disorder prediction 343 368 - -
Lele15g1552 530 CDD ABC_6TM_Pgp_ABCB1_D2_like 30 241 - -
Lele15g1552 530 SUPERFAMILY ABC transporter transmembrane region 28 255 IPR036640 GO:0005524|GO:0016020
Lele15g1552 530 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 41 170 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1552 Lele-ChrLele15 9196237 9200819 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1552 42 269 Calmodulin-binding Proteins AT2G36910 19.436 5.42e-09 57.4