Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1542 ATGTCCATTATTGAGAGCACAGATTTAGCAAGCTTTGACGAGGGCACCTTGAAGCTAAACGATGAAGGATTTCTTCTGGGAAATATATTAGATGCTATTCTTACCCTATATGGTGATCAAATTAGGCTTCAGGTGGTCTTGTCTGACATTTTGCTTAATATGGTGAGCCACACACCATCCCCAAATGGCTGGATAGAAATTAAGATTTCACCCGGTTTGAAGACGATGCAAGATGGCGACGAGTTTGTCCATCTCCAGTTCAGAATGACACATGCGGGTCGAGGCCTTCCTTCTGCTGTTCTTCAGGATATGTTTGAAGCAGAGGATCAATGGACTACCCAGGAAGGTCTAGGGCTAAATATGTCCCGGAAAATCCTCAGTAGGATGAATAGTCGTGTTCACTATGTACGAGAACATAACAAGTGCTACTTCCTCATTGATCTTGAACTTAGAACAAGAAAATAA 465 0.4237 MSIIESTDLASFDEGTLKLNDEGFLLGNILDAILTLYGDQIRLQVVLSDILLNMVSHTPSPNGWIEIKISPGLKTMQDGDEFVHLQFRMTHAGRGLPSAVLQDMFEAEDQWTTQEGLGLNMSRKILSRMNSRVHYVREHNKCYFLIDLELRTRK 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1542 154 Gene3D - 18 150 IPR036890 -
Lele15g1542 154 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 28 148 IPR036890 -
Lele15g1542 154 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 38 149 IPR003594 -
Lele15g1542 154 ProSiteProfiles Histidine kinase domain profile. 36 152 IPR005467 -
Lele15g1542 154 CDD HATPase_Phy-like 37 150 IPR044767 -
Lele15g1542 154 SMART HKATPase_4 38 152 IPR003594 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1542 Lele-ChrLele15 9131816 9132910 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1542 2 152 Histidine Kinase Gene Family AT4G18130 47.159 8.77e-51 171