Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele15g1541 | ATGAAGGGTTTGCTGATTTTGTGTTCTCGTTTCCAGAAGGGCGATGCAATGAAGCAGTCTTTCGACATTTCGGCTTCTGGTCCAACCAAGATTCCATCTATAAATATTCCCAAAGAAGTGGGACGCCATGCTTGGGAGGTTTTATCTGGATCTGATGCCTACCATGCTTCATCGGATGCTAGTCTTTTTTCTAGCTCGTTACCTGTTTTGCCACATGAAAAGTTGAACTTGAACGACACCAAAAATGAGTATCAGTCTGTGGATGACATCTCATCTGGTTTTAAAAAGCTCCACCAAGAGTTAGAGTTTAATGAATCACTTGAAGATGCAAATATTCATGCACTTGGAACAACGCTTCCAGATGATGAGGATGAGCTTTTAGCTGGCATAACAGATGATTTTGACCTGACTGGTTTGCCTGGTTCCCTGGAGGACTTGGAAGATTATGATCTTTTTGGGGGTGGAGGTATGGAACTGGAAAATGATCCTCAGGAAAGTCTTACAGTGGGGATTTCAAAATTAAGTTTCTCTGATGGTACAATTGGCAATGGTTTGCCCCATTTCTCTTTTCCTAATGGTGTTGGAACTGTTGCTGGGGAACATCCGTATGGGGAACATCCTTCTCGAACATTATTTGTTCGAAATATTAACAGTAATGTAGAGGATTCAGAATTGAGAGCCCTTTTTGAGCAATATGGTGATATTAGAACCCTCTATACTGCATGTAAACATCGGGGGTTTGTAATGATATCCTATTATGACATCCGTGCTGCTCGAACAGCTATGCGTGCATTACAAAACAAACCACTGCGGCGGAGGAAACTTGACATTCATTTCTCAATACCAAAGGATAATCCATCAGACAAGGATATAAATCAAGGAACCTTGGTGGTTTTTAATTTGGATCCATCTGTTTCAAATGAAGACCTTCGACAAATATTTGGGGCTTATGGCGAGGTTAAAGAGATAAGGGAAACTCCTCACAAGAGGCATCATAAATTTGTTGAATTTTATGATGTCAGAGCTGCGGAAGCGGCACTTAAATCATTGAACAGGAGTGACATAGCGGGTAAACGTATAAAGCTGGAACCTAGTCGTCCTGGTGGAGCTCGTCGAAATTTGATGCTCCAACTAAATCAAGATCTTGATCAAGATGAATCTCGGAATTTTCGACATCAAGTGGGTTCACCTGTAGCCAACTCTCCACCAGGTAACTGGTTGCAGTCTAACAGCCCCATTGAACATAAGCCAATGCAATCTATCAGTAATTCTCCTGGTTCTAGGATTATGAGCCCAACAACTGGCAACCATTTACCAGGATTAGCTTCAATCTTGCAACCTCAAGGATCTAACTCTATAAAGGGTGCAGCTATTGGTAAGGACCTAGGAAGGAGTAGTCATGGAGATCACGTGTTTAGTAGTACCAGTTCATCACATGGAGCCATATTTCAATCTCACTCACTTCCAGAACCAAAATTGGGCCAATATCGTGGAACTTTGTCCTCTTTTGGTCCATCAACTTCAAATGGATCTTCTGTGGAAACCTTGTCTGGGCCTCAGTTTCTTTGGGGAAATTCAAGCTTATACTCTGAGCACACTAAACCTTCACGTTGGCCTAGACCATCTGTATGGCCTCCATTCACATCGAATGGAAAGGGTCATGGCTTCCCATACTCTGGTCAGAATGGCTCCTTTGTTGGATCTTCCCAGCATCATCTTCATCATCATGTAGGCTCTGCTCCATCAGGTGTTCCATTTGAGAGGCGCTTTGGTTTTCTTCCTGAATCTCCTGAAACCTCATTTATTAATCATGTTGGTTATGGAGGCTTAAATGTGGGACACAATGATGGAAACTACATGATTAACATGGGTGGATCTGTTCATGCTGGCATTACTATGCCGAGGAATGTGTCTGAAAATGTTCAATCAAATTTCAGAATGAGATCTTCTCCAAGGCTTAGCCCTGTGTTTCTGGGTAATGGTCCTTATTCTGGGCTGCCGCCCACTGCCCTGGACGGTTTGACTGACCGTGGAAGGAGTAGACGGCTAGAGAATAATGGTAACCAAGTTGATAGCAAAAAGCAATTTGTGCTTGACTTGGATAAGATTAGAAGTGGTGAAGATGCAAGGACTACTTTAATGATAAAGAATATCCCAAATAAGTACACTTCAAAAATGCTACTAGTTGCCATTGACGAAAATCACAGGGGCACCTATGATTTCCTCTATCTGCCTATTGATTTTAAGAATAAGTGTAATGTGGGTTATGCATTTATCAACATGCTGTCACCCTCTCTCATCATTCCATTCTACGAGACATTCAATGGAAAGAAGTGGGAGAAGTTTAATAGTGAGAAAGTTGCTTCTTTGGCGTATGCCCGAATCCAAGGAAAGGTTGCCCTTGTGAGCCACTTCCAGAATTCAAGTTTGATGAATGAAGACAAGCGATGCCGCCCTATTCTCTTCCACTCAGAGGGTCCTGAAGCCGGTGATCAGATCGTACAAGAACATCTTCCCTCCAACAATCTCAACATCCAGGTCCTCAGGCCAAATGATTCACATATGAATGACTCTCCTGGAAGCCCCCCCAATGATAACCCTCCTGTGAACTTGGAGACAAGGGTTGATATTTTGAGGGTTGGCAAGTTGACTTTGGGGGGGGGGGGTTACAAATTGTATAGAGGGAGGTAA | 2691 | 0.4281 | MKGLLILCSRFQKGDAMKQSFDISASGPTKIPSINIPKEVGRHAWEVLSGSDAYHASSDASLFSSSLPVLPHEKLNLNDTKNEYQSVDDISSGFKKLHQELEFNESLEDANIHALGTTLPDDEDELLAGITDDFDLTGLPGSLEDLEDYDLFGGGGMELENDPQESLTVGISKLSFSDGTIGNGLPHFSFPNGVGTVAGEHPYGEHPSRTLFVRNINSNVEDSELRALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDNPSDKDINQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKRHHKFVEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGGARRNLMLQLNQDLDQDESRNFRHQVGSPVANSPPGNWLQSNSPIEHKPMQSISNSPGSRIMSPTTGNHLPGLASILQPQGSNSIKGAAIGKDLGRSSHGDHVFSSTSSSHGAIFQSHSLPEPKLGQYRGTLSSFGPSTSNGSSVETLSGPQFLWGNSSLYSEHTKPSRWPRPSVWPPFTSNGKGHGFPYSGQNGSFVGSSQHHLHHHVGSAPSGVPFERRFGFLPESPETSFINHVGYGGLNVGHNDGNYMINMGGSVHAGITMPRNVSENVQSNFRMRSSPRLSPVFLGNGPYSGLPPTALDGLTDRGRSRRLENNGNQVDSKKQFVLDLDKIRSGEDARTTLMIKNIPNKYTSKMLLVAIDENHRGTYDFLYLPIDFKNKCNVGYAFINMLSPSLIIPFYETFNGKKWEKFNSEKVASLAYARIQGKVALVSHFQNSSLMNEDKRCRPILFHSEGPEAGDQIVQEHLPSNNLNIQVLRPNDSHMNDSPGSPPNDNPPVNLETRVDILRVGKLTLGGGGYKLYRGR | 896 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele15g1541 | 896 | PANTHER | RNA RECOGNITION MOTIF-CONTAINING | 58 | 840 | - | - | |
Lele15g1541 | 896 | SUPERFAMILY | RNA-binding domain, RBD | 206 | 369 | IPR035979 | GO:0003676 | |
Lele15g1541 | 896 | Pfam | RNA recognition motif 2 | 710 | 806 | IPR007201 | - | |
Lele15g1541 | 896 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 296 | 361 | IPR000504 | GO:0003723 | |
Lele15g1541 | 896 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 211 | 275 | IPR000504 | GO:0003723 | |
Lele15g1541 | 896 | CDD | RRM2_MEI2_like | 293 | 363 | - | - | |
Lele15g1541 | 896 | CDD | RRM3_MEI2_like | 713 | 798 | IPR034454 | - | |
Lele15g1541 | 896 | Gene3D | - | 293 | 390 | IPR012677 | - | |
Lele15g1541 | 896 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 294 | 367 | IPR000504 | GO:0003723 | |
Lele15g1541 | 896 | MobiDBLite | consensus disorder prediction | 849 | 870 | - | - | |
Lele15g1541 | 896 | FunFam | Protein MEI2-like 1 | 293 | 388 | - | - | |
Lele15g1541 | 896 | SMART | rrm1_1 | 210 | 278 | IPR000504 | GO:0003723 | |
Lele15g1541 | 896 | SMART | rrm1_1 | 712 | 788 | IPR000504 | GO:0003723 | |
Lele15g1541 | 896 | SMART | rrm1_1 | 295 | 363 | IPR000504 | GO:0003723 | |
Lele15g1541 | 896 | Gene3D | - | 198 | 292 | IPR012677 | - | |
Lele15g1541 | 896 | CDD | RRM1_MEI2_like | 208 | 284 | IPR034453 | - | |
Lele15g1541 | 896 | SUPERFAMILY | RNA-binding domain, RBD | 712 | 796 | IPR035979 | GO:0003676 | |
Lele15g1541 | 896 | MobiDBLite | consensus disorder prediction | 667 | 686 | - | - | |
Lele15g1541 | 896 | FunFam | MEI2-like protein 5 isoform 2 | 198 | 292 | - | - | |
Lele15g1541 | 896 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 209 | 282 | IPR000504 | GO:0003723 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele15g1541 | Lele-ChrLele15 | 9124169 | 9131403 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele15g1541 | 204 | 372 | Eukaryotic Initiation Factors Gene Family | AT1G71770 | 25.907 | 3.20e-06 | 48.9 |