Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1526 ATGATGCCTCCAAAGATCAGTTTGAATATACTCATAATAGTCTTGTCCATTTCCATTTCAACTATATTTTCAAATATTGCAGAATCAAGCTCACTGCTGCAAGTTGAAATTGAAGCTTTGACAGCTTTCAAAAGCTCTATCACTCATGACCCAAATGGAGCATTGGCAGATTGGGTTGACACAACCCATCATTGCAACTGGTCTGGCATTGCTTGTGACCCTTCTTCACAACATGTTATCTCACTCACCCAGGTTGGCAAAAAGCTCCAAGGTAAAATTTCACCGTTCCTGGGAAATCTTTCAGGCCTTCAGGTTCTTGACTTGACCTCAAATTCATTTTCTGGGTTCATTCCTTCTCAGCTTATCCTTTGCTCCCAACTTTCTCAATTGCTTCTTTTTGAAAACTCTCTCTCTGGTCCAATCCCAACTGAGCTAGGAAACTTGAAAAGTTTGCAGTATTTGGATTTGGGTAGTAACAATCTGAATGGAAGTCTCCCAGAAAGCTTATTTAACTGCACCTCTTTGCTGGGTATTGCTTTTAATTCCAACAATCTGAATGGTGAAATCCCTTCAAATATTGGCAATTTGGTTAACGTTACACAAATTGCAGGATTTACTAATCAGTTTGTTGGATCTATTCCTCCTTCCATAGGTAAGTTAAGGGCTTTACAATCTCTAGATTTTAGTCAAAACCAGTTGTCTGGAAAGATACCTAGAGAGATTGGGAATCTAGGAAACTTAGAATATCTTGTCCTATTTGAAAATTCCTTGGTTGGAAAAATCCCTTCTGAACTTGGTGAGTGCATGAAGCTAGTGAACCTTGAACTGTACACAAATCAGTTGTCCGGAAGCATTCCCTCTGAGATAGGAAACTTAGTTCATTTGGAAACATTAAGGATATATGATAATAACTTCACTTCCACAATTCCTTCTTCCATTTTCCAGCTGAAATCATTAACCCACTTGGGTCTGTCAGAGAATCTGTTAGAGGGAATAATATCTCCTGAAATTGGATCTTTGAGGTCACTTAAAGTTCTAACCTTGCATTCAAATAAGTTTACTGGACAAATTCCTTCATCAATTACAAAGTTGACAAACTTAACATACCTCTCAATGAGCCAGAATCTCCTTTCAGGTAAACTTCCTTCCAACATGGGATTGCTTCATAATCTGAAGTTTCTTGTCCTGAACGCCAACCTTTTTCATGGTCATATCCCTCCTAGTATCACCAATTGTACTAGTATGGTGAATGTAAGTTTGAGCTTTAATTCACTAAGTGGGAATATTCCAGAAGGCTTTTCAAGGATGCCTAATCTTACTTTCTTGTCTTTTTCATCAAACAAAATGTCTGGTGAAATCCCAGATGACCTCTTCAACTGCTCAAATCTTCTAACTCTGAGTTTGGGTGAGAACAATTTCAGTGGGATGATAAAACCTACTATCAAAAAACTGTTGAATCTCAAGACACTTCAACTGAATTTAAATTCTTTGACAGGGCCAATTCCACTTGAGATAGGGAATTTAAATCAACTTGTGACATTAGCACTTTCTCATAATAGATTTTCTGGTCAAATTCCTTTAGAGCTATCCAATCTCAGTCTTCTTCAGGGCCTCTTCTTGCAAGGGAATGCATTAGAAGGAACAATACCTAATCAATTATTTGAACTGAATCAACTAACCGAGCTTAATCTACATCAGAACAAGCTGGTTGGTCAAATCCCAAAGGCTTTCTCCAAGTTTAAGATGCTTTCTCACTTAGACCTCCATGGGAACATGTTCAATGGAACAATTCCAAGAGAGTTGAGTCAACTCAGCCAGCTATTGATGTTGGATTTGTCACAGAACCACCTGACAGGTTCAATTCCTGGGGATGTCATCGCCCATTTCAGAGACATGCAACTATATCTAAACTTGTCTCACAACCACTTCATCGGAGCTATACCAGAAGAGCTTGGTATGTTGGAAATGATACAAGACATTGATGTTTCAAACAACAATCTATCTGGTGTGATTCCCAAGACACTTTCTGGGTGCAGAAATCTATTTAATCTTGATCTTTCAGGCAATAATATCTCAGGTCCTATTCCAGCAAAGGCTTTCAGTCACATGGACTTACTTCAAAGCTTGAACCTTTCAAGGAACCAGTTAGATGGAGAAATCTCTGAAACATTGTCAAAGCTTGAGCATCTTATTTCCTTAGATCTTTCTCATAATAACTTGAAGGGATCTATCTCTGATAATTTTGCCAATCTCTCCAATCTAAAGCTTCTCAACCTTTCTTTTAACCAACTTGAAGGTCAAGTTCCATCAAGCGGAATATTCTCACACATAGACGCATCTGCATTGATAGGAAACCCTGCTCTTTGTGGAACCAAATTTCTGATGCCATGTAGGGAAACAAGAAGATCTCATTCATTGTCCAAGAAGAGCATATCTATTATTGCCTCACTTGGTTCTGCTATAGTCCTCCTAATTTTGGTATTGGTGATTCTATTTCTCATTCAACGTGCCAGATTACGTCGTTCTAACAAGCCTGAAAATCCTGAAATACCAAGCCACACATCAGCTATGACACTTGAAAGATTTGATAGAAAGGACCTAGAAAATGCTACTAGTTTTTTCAGCTCAGCTAACGTCATTGGAGCTAGCAATTTGAGCACTGTTTATAAGGGTCAATTGGGAGATGGCAAGACAGTGGCAATAAAAAAGCTAAACTTGGAACATTTTGCTGCAGAATCTGACAAACTTTTCAAGAGAGAAATAAGCATCTTGAGCCAACTAAGGCATAGGAATTTGGTGAAGGTAATGGGTTATGCTTGGGAGAGTGGGAAAATAAAGGCTCTAGTTTTGGAGTACATGGAGAATGGGAATTTGGATAGCATAATACATGAAGAAGAAGGGATAATGGATCCAAGTAGATGGACATTATGTGAAAGGCTCAATGTTTTCATTTCTGTTGCTGAAGGATTGGATTACTTGCACTCTGGTTATGATATTCCAATTGTGCATTGTGATTTAAAGCCTTCTAATATTCTTTTGGATGGAGATTTTGTGGCCCATGTGAGTGATTTTGGGACTGCTAGAATGCTTGGTCTCCATTTGCAAGATGCTGCTTCTGTGTCCTCATCAACAATTTTCCAAGGCACCGTTGGTTATATGGCTCCAGAGTTTGCGTACATGAGGAAAGTAACGACCAAATTTGACGTGTTCAGCTTTGGTATAGTAGTAATGGAGTTTCTAACAAGAAGGAGACCCACAGGGCTCGCAGAAGAGGATGGCTTGCACTTAAGTCTACGAGAAATAGTGCAGAAAGCACTTTCAAATATTGCAACAAAGCCACATGTTCTTCATCAACAACTTCTGGATCCTTTGCTGTTTGACAATGATCATCAATATGAAGATGTCTTAGTGGATCTCTTGAAACTATCATTGACTTGTACCCTCCCTGATCCTCAAGATCGTCCTACTATGAACCAAGTGTTGTCTCTCTTGATCATGCTCAAGAAGAATATACCATAG 3519 0.3882 MMPPKISLNILIIVLSISISTIFSNIAESSSLLQVEIEALTAFKSSITHDPNGALADWVDTTHHCNWSGIACDPSSQHVISLTQVGKKLQGKISPFLGNLSGLQVLDLTSNSFSGFIPSQLILCSQLSQLLLFENSLSGPIPTELGNLKSLQYLDLGSNNLNGSLPESLFNCTSLLGIAFNSNNLNGEIPSNIGNLVNVTQIAGFTNQFVGSIPPSIGKLRALQSLDFSQNQLSGKIPREIGNLGNLEYLVLFENSLVGKIPSELGECMKLVNLELYTNQLSGSIPSEIGNLVHLETLRIYDNNFTSTIPSSIFQLKSLTHLGLSENLLEGIISPEIGSLRSLKVLTLHSNKFTGQIPSSITKLTNLTYLSMSQNLLSGKLPSNMGLLHNLKFLVLNANLFHGHIPPSITNCTSMVNVSLSFNSLSGNIPEGFSRMPNLTFLSFSSNKMSGEIPDDLFNCSNLLTLSLGENNFSGMIKPTIKKLLNLKTLQLNLNSLTGPIPLEIGNLNQLVTLALSHNRFSGQIPLELSNLSLLQGLFLQGNALEGTIPNQLFELNQLTELNLHQNKLVGQIPKAFSKFKMLSHLDLHGNMFNGTIPRELSQLSQLLMLDLSQNHLTGSIPGDVIAHFRDMQLYLNLSHNHFIGAIPEELGMLEMIQDIDVSNNNLSGVIPKTLSGCRNLFNLDLSGNNISGPIPAKAFSHMDLLQSLNLSRNQLDGEISETLSKLEHLISLDLSHNNLKGSISDNFANLSNLKLLNLSFNQLEGQVPSSGIFSHIDASALIGNPALCGTKFLMPCRETRRSHSLSKKSISIIASLGSAIVLLILVLVILFLIQRARLRRSNKPENPEIPSHTSAMTLERFDRKDLENATSFFSSANVIGASNLSTVYKGQLGDGKTVAIKKLNLEHFAAESDKLFKREISILSQLRHRNLVKVMGYAWESGKIKALVLEYMENGNLDSIIHEEEGIMDPSRWTLCERLNVFISVAEGLDYLHSGYDIPIVHCDLKPSNILLDGDFVAHVSDFGTARMLGLHLQDAASVSSSTIFQGTVGYMAPEFAYMRKVTTKFDVFSFGIVVMEFLTRRRPTGLAEEDGLHLSLREIVQKALSNIATKPHVLHQQLLDPLLFDNDHQYEDVLVDLLKLSLTCTLPDPQDRPTMNQVLSLLIMLKKNIP 1172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1526 1172 FunFam LRR receptor-like serine/threonine-protein kinase FLS2 33 184 - -
Lele15g1526 1172 Pfam Leucine rich repeat N-terminal domain 36 73 IPR013210 -
Lele15g1526 1172 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 627 801 - -
Lele15g1526 1172 CDD STKc_IRAK 880 1164 - -
Lele15g1526 1172 Gene3D Ribonuclease Inhibitor 197 267 IPR032675 -
Lele15g1526 1172 Gene3D Ribonuclease Inhibitor 382 432 IPR032675 -
Lele15g1526 1172 Pfam Leucine rich repeat 658 716 IPR001611 GO:0005515
Lele15g1526 1172 Pfam Leucine rich repeat 294 353 IPR001611 GO:0005515
Lele15g1526 1172 Pfam Leucine rich repeat 558 617 IPR001611 GO:0005515
Lele15g1526 1172 Gene3D Ribonuclease Inhibitor 34 192 IPR032675 -
Lele15g1526 1172 Gene3D Ribonuclease Inhibitor 268 381 IPR032675 -
Lele15g1526 1172 Gene3D Ribonuclease Inhibitor 526 633 IPR032675 -
Lele15g1526 1172 ProSiteProfiles Protein kinase domain profile. 874 1167 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele15g1526 1172 Gene3D Ribonuclease Inhibitor 433 525 IPR032675 -
Lele15g1526 1172 Gene3D Ribonuclease Inhibitor 634 805 IPR032675 -
Lele15g1526 1172 Gene3D Phosphorylase Kinase; domain 1 836 952 - -
Lele15g1526 1172 Gene3D Transferase(Phosphotransferase) domain 1 953 1171 - -
Lele15g1526 1172 FunFam Receptor-like protein kinase 7 407 626 - -
Lele15g1526 1172 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 581 1164 - -
Lele15g1526 1172 SUPERFAMILY Protein kinase-like (PK-like) 850 1167 IPR011009 -
Lele15g1526 1172 PRINTS Leucine-rich repeat signature 730 743 - -
Lele15g1526 1172 PRINTS Leucine-rich repeat signature 751 764 - -
Lele15g1526 1172 Pfam Protein kinase domain 877 1162 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele15g1526 1172 SUPERFAMILY L domain-like 529 792 - -
Lele15g1526 1172 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 953 1172 - -
Lele15g1526 1172 SMART serkin_6 874 1166 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele15g1526 1172 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1001 1013 IPR008271 GO:0004672|GO:0006468
Lele15g1526 1172 FunFam Leucine-rich repeat receptor-like protein kinase TDR 185 400 - -
Lele15g1526 1172 SUPERFAMILY RNI-like 85 399 - -
Lele15g1526 1172 SUPERFAMILY L domain-like 310 598 - -
Lele15g1526 1172 Pfam Leucine Rich Repeat 223 244 IPR001611 GO:0005515
Lele15g1526 1172 FunFam LRR receptor-like serine/threonine-protein kinase FLS2 836 952 - -
Lele15g1526 1172 SMART LRR_typ_2 244 268 IPR003591 -
Lele15g1526 1172 SMART LRR_typ_2 604 628 IPR003591 -
Lele15g1526 1172 SMART LRR_typ_2 751 776 IPR003591 -
Lele15g1526 1172 SMART LRR_typ_2 292 316 IPR003591 -
Lele15g1526 1172 SMART LRR_typ_2 220 243 IPR003591 -
Lele15g1526 1172 SMART LRR_typ_2 100 124 IPR003591 -
Lele15g1526 1172 SMART LRR_typ_2 654 677 IPR003591 -
Lele15g1526 1172 SMART LRR_typ_2 148 172 IPR003591 -
Lele15g1526 1172 SMART LRR_typ_2 388 412 IPR003591 -
Lele15g1526 1172 SMART LRR_typ_2 532 556 IPR003591 -
Lele15g1526 1172 SMART LRR_typ_2 703 726 IPR003591 -
Lele15g1526 1172 SMART LRR_typ_2 727 750 IPR003591 -
Lele15g1526 1172 SMART LRR_typ_2 436 460 IPR003591 -
Lele15g1526 1172 SMART LRR_typ_2 340 364 IPR003591 -
Lele15g1526 1172 SMART LRR_typ_2 678 702 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1526 Lele-ChrLele15 9034702 9038532 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1526 15 1168 Receptor kinase-like Gene Family AT5G46330 52.414 0.0 1136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Lele15g1526 Pkinase 1.3e-43 CL0016