Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1507 ATGCCCACTCGATGGTCCTTCCAGGATTTTAAATTGTTCTATGACGCCAAGTTTGGTAGGAAGAGAATCTCGGAGAATGGCGAGGCAGCCGATGATCCCGTCAGTAATGGAAATGGAAATCTACATCCCAAAAGAACATCGGATTCGACTATCTATGAGCAGTTCCAGAGCCAGGGGCAGAATTCAAACCATTCAAATGGTGTTTTGCCAAAAAATGTTGGTGACAGGCCACAGAAGTCTTTGCTTCCTCCCTTTGAATCTGCAGAAATGCGTACTTTAGCAGAGAGCTTAAGTAGGGATATTATTCGTGGGAATCCAGATGTGAAGTGGGAAAGCATCAAGGGGTTAGAAACGGCCAAACGCTTAATGAAAGAGGCTGTTGTAATGCCAATCAAGTATCCCAAATACTTTACTGGTCTATTATCACCTTGGAAAGGGATTCTTCTCTTTGGGCCGCCAGGGACAGGAAAGACAATGCTTGCAAAGGCCGTTGCAACAGAGTGCAAGACTACATTTTTTAATATTTCGGCATCCTCTGTTGTCAGCAAATGGAGAGGCGATTCTGAGAAGTTAGTTAGGGTACTATTTGAGCTTGCTAGGCACCATGCACCCTCAACAATATTTCTTGATGAGATTGATGCAATCATTAGTCATCGTGGTGAATCACGCAGTGAGCATGAAGCAAGTAGGCGTTTAAAAACTGAGCTACTTATACAGATGGATGGCTTGACACGGACTGATGAACTTGTTTTTGTTTTGGCGGCAACAAATATTCCCTGGGAACTGGATGCAGCCATGCTCCGACGTCTTGAGAAGCGAATCCTTGTGCCACTTCCTGAACCAGAAGCAAGAAAAGCAATGTTTGAGGAACTCCTTCCACCACAGCCTGGTGAGGAGCATATGCCCTATGATTTACTGGTGGAGCAGACAGAAGGATATTCAGGTTCAGATATCCGGTTACTCTGCAAAGAGGCAGCAATGCAGCCATTGAGACGCTTAATGTCACAACTTGAACAGAGAGAAGAGGTGGTGCCGGAAGAAGAGTTGCCAAAAGTAGGGCCTATCGGACCTAAAGATATAGAGATTGCTTTGAAGAACACAAGGCCGTCTGCTCATCTCCATGCCCACAAATATGGGAAGTTCAATGCTGATTATGGAAGTCAAATACTGCAATGA 1176 0.449 MPTRWSFQDFKLFYDAKFGRKRISENGEAADDPVSNGNGNLHPKRTSDSTIYEQFQSQGQNSNHSNGVLPKNVGDRPQKSLLPPFESAEMRTLAESLSRDIIRGNPDVKWESIKGLETAKRLMKEAVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVATECKTTFFNISASSVVSKWRGDSEKLVRVLFELARHHAPSTIFLDEIDAIISHRGESRSEHEASRRLKTELLIQMDGLTRTDELVFVLAATNIPWELDAAMLRRLEKRILVPLPEPEARKAMFEELLPPQPGEEHMPYDLLVEQTEGYSGSDIRLLCKEAAMQPLRRLMSQLEQREEVVPEEELPKVGPIGPKDIEIALKNTRPSAHLHAHKYGKFNADYGSQILQ 391
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1507 391 SMART AAA_5 143 280 IPR003593 -
Lele15g1507 391 Pfam AAA+ lid domain 305 341 IPR041569 -
Lele15g1507 391 Gene3D - 279 367 - -
Lele15g1507 391 FunFam Katanin p60 ATPase-containing subunit A-like 2 106 290 - -
Lele15g1507 391 MobiDBLite consensus disorder prediction 39 69 - -
Lele15g1507 391 PANTHER AAA DOMAIN-CONTAINING 58 387 - -
Lele15g1507 391 Gene3D - 106 379 IPR027417 -
Lele15g1507 391 FunFam Katanin p60 ATPase-containing subunit A-like 2 279 367 - -
Lele15g1507 391 CDD AAA 141 278 - -
Lele15g1507 391 Pfam ATPase family associated with various cellular activities (AAA) 147 277 IPR003959 GO:0005524|GO:0016887
Lele15g1507 391 MobiDBLite consensus disorder prediction 25 82 - -
Lele15g1507 391 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 106 373 IPR027417 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele15g1507 Lele-ChrLele15 8899803 8905369 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1507 141 350 Calmodulin-binding Proteins AT3G56690 37.500 5.73e-33 129
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g0966 13 20856125 20857914 Lele15g1507 15 8899803 8905369 hybridization