Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1498 ATGAGGCGGAATTGCAACTTGGAGCTTCGTCTTTTTCCTTCCTTGGAAACCCGTCACCTCCATGAAACGTCGACGGAACAAGACAGTGAAAGCCCGCGGGAAAATCTGCAGAAGCTCACCATTTTCTATGACGGGAAGATGTGTGTTTGCGATGTCACCGAATTTCAGGCTAGATGGATCTTGATGCTGGCAAATAGAGAAATGAAGGAAAGAGCAAGGACCCCAAACGTGTCTGAGCCATCTTCACCAAACACAGTGCCATTGTATAGCCCAAGTAGTGGTCTTTCCATGAAAAGATCGCTCCAAAATTTCCTGCAGAAGAGAAAGAATCGAATCCTTGAAGCTTCACCGTACCATCACTAG 363 0.4656 MRRNCNLELRLFPSLETRHLHETSTEQDSESPRENLQKLTIFYDGKMCVCDVTEFQARWILMLANREMKERARTPNVSEPSSPNTVPLYSPSSGLSMKRSLQNFLQKRKNRILEASPYHH 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1498 120 ProSiteProfiles Tify domain profile. 32 66 IPR010399 -
Lele15g1498 120 Pfam tify domain 37 65 IPR010399 -
Lele15g1498 120 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 16 118 IPR040390 -
Lele15g1498 120 MobiDBLite consensus disorder prediction 70 94 - -
Lele15g1498 120 SMART tify_2 32 66 IPR010399 -
Lele15g1498 120 Pfam Jas motif 98 118 IPR018467 -
Lele15g1498 120 MobiDBLite consensus disorder prediction 75 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1498 Lele-ChrLele15 8798684 8799895 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1498 1 119 Tify Gene Family AT1G30135 45.669 3.76e-28 98.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Lele15g1498 tify 1e-10 No_clan