Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1489 ATGATAAGGATGATGACGGAGGAGGGAAGGTACACTCTTGAGAAGCAAGGAAGACCATTTGGGAAATTCAAGAGACCAACAAGGAGCTTAGTTCCTGAAAGTCAGGCAGCAAAGATCTGTGAGCTGTGGATTGTCTTTACCGGAGCTGAGGCCGAGGCTCTGAAACCTACTCAGTCTTTGCCTTTGAAAGCATTTCTGCAAACTGCGAAAAGCTTAAACGAAGGCCTCCTGACTTGGACCGCGATATATCGGAGCGCTCAAAAAAGTGTAGGGAACACAAGGGAAATAAGGTTCAGGCTCGAGCTTTTGGGTTGTAAAAGGCATGATTGTGGAATGGAGGAGGATGCGATTCAAGCACAAGCGTGTAAATTCGCTAGAGTTGGAAATGGCAGAAACGACTCCAACAAGATAGGTTCTAGAGGGAGCGACCAATACCCAGACGGCGAAGAGAATGCAGAGCTGATGAGAAGAGGCGGAGTTGGCGACGTCAGCTCGAATCGGTTCCATAGCTGGCACCACCATTCTTCAAGAATCATTAGGGTTTCTCGAGCATCTGGAGGGAAAGACCGGCACAGCAAGGTCATGACTTCGAAGGGTTTAAGAGACCGAAGGGTTAGGCTCTCGGTAACTACGGCAATCCAGTTCTATGATCTTCAAGATCGACTTGGCTATGACCAACCCAGTAAAGCAGTGGAGTGGCTAATCAAAGCATCTTCTGACGCCATTTCCGAGCTTCCTTCTCTGAACAACACATTCCCTGATACCCCAAAGAAGCCAAGAGATGAGAAAAGAGGGAGTGTCGGAACACAACAAGGGTTTGATACGGCTGATGCTGAAGTAGATGGTGATGGTGATTATCATCAGACTCAAAGTCAGAACCTTTCTTTGTCTAAGTCTGCCTGTAGCAGCACTTCCGAGACAAGCAAAGGCTCCGGCTTGTCCCTCTCAAGGTCTGAGATTCGAGTAAACCGTGTGAAGGCCCGGGAGAGGGCAAGAGAGAGAGCAGCAAAAGAGAAGGAGAAAGAGAACACTGCACATCCCCACAATGTGAATAACCCCATTTCTCATACTGCTTCTTTCACTGAGCTTCTCACCGGAGGGATTACTAGTACTGTTCCTTCCACCACTAGTCCCACCGGCGGCGACGATCATCATGAGCCTAATTTGTTCAGCAAGGCAGGGAGACAGCAATGGTGTACAACACCCATGGACTACTTTAACTCAGGCCTTGTGGGGAATCCCTCTATTAATAAAACTCATACTCATAATCAATCTTCAGGGTTCTCAGGACAGATCCAATTAGGGAACTCTTCCCTTCCCCTTCAGGCACTGTCTGTTTCTCCATTCAATGTGGGGTGTGAAAATCACTCGGATCAGCTGCAGCATTTCTCATTCATGCCTGACCATAATCTCATACCCAGCGGAAGCAGCGACTACAACCTCAACTTCACCAGGGGGACCCTTCAGTCCAATTCACCGTCTGTTTTGCCTCACCCTCTTCAGAGCTATGTTATGGCGACCTAA 1524 0.4836 MIRMMTEEGRYTLEKQGRPFGKFKRPTRSLVPESQAAKICELWIVFTGAEAEALKPTQSLPLKAFLQTAKSLNEGLLTWTAIYRSAQKSVGNTREIRFRLELLGCKRHDCGMEEDAIQAQACKFARVGNGRNDSNKIGSRGSDQYPDGEENAELMRRGGVGDVSSNRFHSWHHHSSRIIRVSRASGGKDRHSKVMTSKGLRDRRVRLSVTTAIQFYDLQDRLGYDQPSKAVEWLIKASSDAISELPSLNNTFPDTPKKPRDEKRGSVGTQQGFDTADAEVDGDGDYHQTQSQNLSLSKSACSSTSETSKGSGLSLSRSEIRVNRVKARERARERAAKEKEKENTAHPHNVNNPISHTASFTELLTGGITSTVPSTTSPTGGDDHHEPNLFSKAGRQQWCTTPMDYFNSGLVGNPSINKTHTHNQSSGFSGQIQLGNSSLPLQALSVSPFNVGCENHSDQLQHFSFMPDHNLIPSGSSDYNLNFTRGTLQSNSPSVLPHPLQSYVMAT 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1489 507 Pfam TCP family transcription factor 186 341 IPR017887 -
Lele15g1489 507 MobiDBLite consensus disorder prediction 285 318 - -
Lele15g1489 507 MobiDBLite consensus disorder prediction 368 389 - -
Lele15g1489 507 MobiDBLite consensus disorder prediction 368 382 - -
Lele15g1489 507 MobiDBLite consensus disorder prediction 321 346 - -
Lele15g1489 507 MobiDBLite consensus disorder prediction 245 354 - -
Lele15g1489 507 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 148 437 IPR005333 GO:0003700
Lele15g1489 507 ProSiteProfiles TCP domain profile. 187 245 IPR017887 -
Lele15g1489 507 ProSiteProfiles R domain profile. 321 339 IPR017888 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1489 Lele-ChrLele15 8752781 8755924 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1489 166 492 TCP Transcription Factor Family AT4G18390 43.454 8.60e-68 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lele15g1489 TCP 6.9e-42 No_clan