Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1483 ATGATGTCCCTCGTGCTATCCCCAATACCTTTTGCTTTATATGTTGAGTCTCCATTCTCCAGCACTTGTGTCTGGTTTCTAGGACATTACAATTGTATGGGGAAGCTAAGAGAAGCTGTTCTTTGTTTTTTGGCACTATTTTGGTTATGGGGTTCTGCAAATGCTGTTCTTTCTCCTAAAGGAGTGAACTTTGAAGTGCAAGCTTTAATGGGCATAAAAGCTTCTCTGCGGGATCCTCATGGTGTCTTAGATAATTGGGATGCGGATGCAGTTGATCCTTGTAGCTGGACTATGGTTACCTGTTCGCCGGACAACTTGGTCATTGGCATGGGTACTCCCAGTCAAAGTCTATCAGGTACTCTGTCTCCGAGCATAGGCAACCTAACGAACCTTCAGATTGTGTTGCTACAGAATAATAATATAACAGGTCCAATACCTTCAGAGCTGGGCAGGCTTTCAAATCTTCATACACTTGATCTCTCTAATAACTTGTTCAGTGGGGAAATTCCTCCCTCTCTCTGTCACCTGAGAAGTCTCCAATACTTGAGGCTCAACAATAACAGTCTTTCTGGAGAATGTCCAGAGCCACTGGCTAACATGACACAGCTTGCTTTTCTTGACTTGTCCTATAACAACCTCAGTGGCCCTATGCCCAGAATTTTGGCCAAATCATTCAACATTGTCGGAAACTCTCTTGTCTGTGGTACGGGGAAAGAGACAAAATGCCATGGCATGACGACATTGATGCCCATGTCCATGAACTTGAACACTACAGAGGATGCTATACCATCAGGCAAAACAAAATCACACAAGATTGCCATTGCCTTTGGCTTAAGTCTAGGATGCCTTTGCTTGATAGTTCTTGGTTTTGGGCTATTCCTATGGTGGAGGCACAAGCATAACCAACAGGCATTTTTTGATGTCAAAGACCGGTATCATGAAGAAGTATACCTTGGAAACCTGAAGAGGTTCCAATTCAGAGAACTGCAGATAGCTACACACAACTTCATCAGCAAGAACATTCTGGGAAAGGGTGGCTTTGGAAATGTGTACAAAGGAGTGCTCTCAGATGGAACTCTTGTAGCTGTCAAGAGGCTTAAAGATGGCAATGCCATAGGAGGAGAGATCCAATTTCAGACTGAAGTTGAAATGATTAGCTTAGCAGTGCACCGAAACCTCCTCAGACTCTACGGATTCTGCATGACACCAACTGAAAGGCTTCTGGTTTACCCTTACATGTCTAATGGAAGTGTTGCTTCCCGTCTCAAGGCTAAACCAGTGTTAGACTGGGGCACTAGGAAGCAAATTGCCTTGGGGGCAGCCAGGGGACTGTTATACCTACATGAGCAGTGTGATCCAAAGATAATTCATAGGGATGTGAAAGCTGCAAACATATTGCTTGATGATTATTGTGAGGCAGTGGTTGGAGATTTTGGGTTGGCAAAGCTTTTGGATCACCGAGATTCACATGTTACAACTGCAGTGAGAGGAACTGTAGGGCATATTGCCCCTGAGTATCTCTCCACAGGGCAATCCTCTGAGAAAACTGATGTTTTTGGATTTGGCATTCTCCTTCTTGAACTGATCACGGGCCAGAGGGCTCTGGAATTTGGGAAGGCAGCAAACCAGAAAGGAGCCATGCTAGATTGGGTGAAGAAAATTCATCAGGACAAGAAGCTGGAACTGTTCGTGGACAAGGATCTGAAGAACAACTATGACAGGATTGAGCTGGAAGAAATGGTTCAAGTGGCTCTCTTGTGTACTCAGTACCTTCCTGGCCACAGGCCCAGAATGTCTGAAGTAGTAAGGATGCTTGAAGGAGATGGATTGGCAGAAAGATGGGAAGCGTCTCAGAGAGCGGATATGAGCAAGTGCAAGGCTCCTGAATTGTCTTCGTCAGATCGATATTCTGATCTCACTGATGACTCTTCGATGCAAGTCCAGGCGATGGAACTTTCAGGCCCGAGGTGA 1971 0.4515 MMSLVLSPIPFALYVESPFSSTCVWFLGHYNCMGKLREAVLCFLALFWLWGSANAVLSPKGVNFEVQALMGIKASLRDPHGVLDNWDADAVDPCSWTMVTCSPDNLVIGMGTPSQSLSGTLSPSIGNLTNLQIVLLQNNNITGPIPSELGRLSNLHTLDLSNNLFSGEIPPSLCHLRSLQYLRLNNNSLSGECPEPLANMTQLAFLDLSYNNLSGPMPRILAKSFNIVGNSLVCGTGKETKCHGMTTLMPMSMNLNTTEDAIPSGKTKSHKIAIAFGLSLGCLCLIVLGFGLFLWWRHKHNQQAFFDVKDRYHEEVYLGNLKRFQFRELQIATHNFISKNILGKGGFGNVYKGVLSDGTLVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKAKPVLDWGTRKQIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDYCEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEFGKAANQKGAMLDWVKKIHQDKKLELFVDKDLKNNYDRIELEEMVQVALLCTQYLPGHRPRMSEVVRMLEGDGLAERWEASQRADMSKCKAPELSSSDRYSDLTDDSSMQVQAMELSGPR 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1483 656 ProSitePatterns Protein kinases ATP-binding region signature. 342 364 IPR017441 GO:0005524
Lele15g1483 656 Gene3D Transferase(Phosphotransferase) domain 1 413 625 - -
Lele15g1483 656 FunFam Putative LRR receptor-like serine/threonine-protein kinase 62 244 - -
Lele15g1483 656 ProSitePatterns Serine/Threonine protein kinases active-site signature. 455 467 IPR008271 GO:0004672|GO:0006468
Lele15g1483 656 SUPERFAMILY Protein kinase-like (PK-like) 312 606 IPR011009 -
Lele15g1483 656 MobiDBLite consensus disorder prediction 618 656 - -
Lele15g1483 656 Gene3D Phosphorylase Kinase; domain 1 305 412 - -
Lele15g1483 656 ProSiteProfiles Protein kinase domain profile. 336 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele15g1483 656 SMART serkin_6 336 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele15g1483 656 SUPERFAMILY L domain-like 65 227 - -
Lele15g1483 656 Pfam Protein kinase domain 338 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele15g1483 656 FunFam Somatic embryogenesis receptor-like kinase 1 413 625 - -
Lele15g1483 656 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 45 616 - -
Lele15g1483 656 Gene3D Ribonuclease Inhibitor 62 244 IPR032675 -
Lele15g1483 656 FunFam Somatic embryogenesis receptor kinase 1 305 412 - -
Lele15g1483 656 Pfam Leucine rich repeat N-terminal domain 65 102 IPR013210 -
Lele15g1483 656 MobiDBLite consensus disorder prediction 633 650 - -
Lele15g1483 656 Pfam Leucine rich repeat 129 189 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1483 Lele-ChrLele15 8707518 8710886 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1483 33 656 Receptor kinase-like Gene Family AT5G16000 77.848 0.0 992
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Lele15g1483 Pkinase 3.7e-44 CL0016