Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1476 ATGCAAGCCAGGGAGGTTTCAGGACTGAATTATCAGTTTCAGGTCCATTCAAGCCCACCATATCCATGCCCGCCTCATTACAGCTCCATACAGAACAATATATCCACATTCCAGCTTCAAAGATTCGCCAACCAGCTATACAATTTCCAAAACCCTCCCCAAATTCAGGACTTTAGTCCTCAATCGTCGTGCTTGAGCAGCAATTCGACTTCCGATGAAGCAGATGAGCAACAACAGAACCTCATTATCAGCGAGAGGAAACACCGGAGGATGATATCCAACAGGGAATCTGCTCGCAGGTCTCGCATGAGGAAGCAGAAACACCTGGATGAGCTGTGGTCGCAGGTAGTGTGGCTCAGGAATGAGAATCATCAGTTGATAGATAAGCTGAACCATGTGTCGGAGAGCCATGATCGAGTGGTTCAGGAGAATGTTCAGCTGAAAGAGGAAGCTTCGGAGCTTTGTCAGATGTTGAAGGACATGAGGCTCAACAGTCCCTGCCCTTCTTTGAGCCCTCTGGAAGATGTCCTCTGCAGCTCCTCCTACCTTGGATCTGATTCCTCCAACCCATCCTTAACCACCTCGACCTCCTCGGCTGATGATTTTTGCTGTCTCTTTTGA 621 0.4863 MQAREVSGLNYQFQVHSSPPYPCPPHYSSIQNNISTFQLQRFANQLYNFQNPPQIQDFSPQSSCLSSNSTSDEADEQQQNLIISERKHRRMISNRESARRSRMRKQKHLDELWSQVVWLRNENHQLIDKLNHVSESHDRVVQENVQLKEEASELCQMLKDMRLNSPCPSLSPLEDVLCSSSYLGSDSSNPSLTTSTSSADDFCCLF 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1476 206 CDD bZIP_plant_GBF1 87 138 IPR045314 GO:0003700|GO:0006355
Lele15g1476 206 Gene3D - 84 139 - -
Lele15g1476 206 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 89 104 IPR004827 GO:0003700|GO:0006355
Lele15g1476 206 SUPERFAMILY Leucine zipper domain 86 136 IPR046347 GO:0003700|GO:0006355
Lele15g1476 206 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 84 147 IPR004827 GO:0003700|GO:0006355
Lele15g1476 206 MobiDBLite consensus disorder prediction 57 78 - -
Lele15g1476 206 Coils Coil 144 164 - -
Lele15g1476 206 FunFam BZIP transcription factor 84 135 - -
Lele15g1476 206 Pfam bZIP transcription factor 86 135 IPR004827 GO:0003700|GO:0006355
Lele15g1476 206 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 26 172 IPR044521 -
Lele15g1476 206 SMART brlzneu 82 146 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1476 Lele-ChrLele15 8663903 8664523 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1476 46 166 bZIP Transcription Factor Family AT3G30530 70.732 2.72e-51 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lele15g1476 bZIP_1 2.7e-13 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g0995 13 21094063 21094683 Lele15g1476 15 8663903 8664523 hybridization
Lele14g0892 14 19471296 19471898 Lele15g1476 15 8663903 8664523 hybridization