Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1471 ATGACTATCAGAGGGGATGCACCTAAAACAGAGAAGAAGAAATCACGAAAGAGCAAAGCAATTGTCGATGATAAAGCACCCTTATTACCCAAAAGTAAAGAGGAAAATGCTGGGTTTGATGATTTTGATGGGGCTTCATTTTCTGGGGCTGTTTTCAACTTATCAACCACAATTATTGGTGCGGGGATCATGGCTTTGCCGGCAACCTTGAAAGAATTGGGGATGGTGACTGGGATTGCTGTGATAATCTTCATGGCTTTCTTGACTGAGAAGTCGATTGAGTTGTTACTTAGGTTTACCAGGGCAGGGAAGGTTGTATCTTATGGAGGACTAATGGGAGACGCCTTTGGAAAGTATGGAAGAGCTCTGGTGCAGATCTGTATTGTAGTCAATAACATTGGTATGCTGATTGTGTACATGATTATAATTGGTGACGTTCTTTCTGGGACATCAGCAAGCGGAGATCACCATGCCGGTATCCTTGAAGGATGGTTTGGTGTACACTGGTGGACTGGGCGTACATTTATTCTACTGTCTACAACGCTTGCTGTATTTGCACCTTTAGCCAGCTTCAAAAGAATTGATTCTTTGAGATTCACATCAGCCTTGTCAGTTGGACTGGCGGTTGTTTTTCTTGTCATTGCTGTGGGAATTTCGATTGTCAAAATTTTAAGTGGAGGAATTGAGATGCCCAAACTCTTCCCAGTCATCACCGATGTGTCTTCATTTATCAACCTGTTCACTGTAGTTCCTGTGCTTGTCACTGCCTATATCTGCCACTACAATGTTCACACCATAGACAATGAACTTGAAGACTCTTCACAGATTCAAGGAGTTGTACGGTCTGCTCTTGGTCTATGCACTGGAGTGTATCTCATGACAAGCTTCTTTGGGTTTTTATTATTTGGTGAAGAAACTCTCGATGATGTGCTTGCCAACTTTGATACTGATCTTGGAATTCCTTTTGGTTCTGTGCTGAATGATGCTGTCCGTATAAGCTATGCTGCACATCTCATGCTTGTATTTCCAGTCGTGTTTTATCCGCTGAGGCTCAACATAGATGGTCTCCTGTTTCCCTCATCAAGGCCTTTGGTTGAGGATAACTTTAGGTTTGCATCAATCACTATAGCCCTAATCGCATCTATCTTCCTGGGAGCAAATTTCATACCCAGCATCTGGGATGCTTTTCAGTTTACTGGCGCAACAGCTGCAGTTTGTCTCGGATTCATATTTCCCGCCGCCATTACTCTTAGGGATCAGTACAATATTGCAACAAAATCAGACAAAATCCTTTCCGTCCTTATGATTGTTTTGGCAGTCTTCGCAAACCTTGTGGCAATATATAGTGATGCCTATGCTTTGATTAAGAAGAATCACACATCCCGTGAATGA 1392 0.426 MTIRGDAPKTEKKKSRKSKAIVDDKAPLLPKSKEENAGFDDFDGASFSGAVFNLSTTIIGAGIMALPATLKELGMVTGIAVIIFMAFLTEKSIELLLRFTRAGKVVSYGGLMGDAFGKYGRALVQICIVVNNIGMLIVYMIIIGDVLSGTSASGDHHAGILEGWFGVHWWTGRTFILLSTTLAVFAPLASFKRIDSLRFTSALSVGLAVVFLVIAVGISIVKILSGGIEMPKLFPVITDVSSFINLFTVVPVLVTAYICHYNVHTIDNELEDSSQIQGVVRSALGLCTGVYLMTSFFGFLLFGEETLDDVLANFDTDLGIPFGSVLNDAVRISYAAHLMLVFPVVFYPLRLNIDGLLFPSSRPLVEDNFRFASITIALIASIFLGANFIPSIWDAFQFTGATAAVCLGFIFPAAITLRDQYNIATKSDKILSVLMIVLAVFANLVAIYSDAYALIKKNHTSRE 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1471 463 MobiDBLite consensus disorder prediction 1 28 - -
Lele15g1471 463 Pfam Transmembrane amino acid transporter protein 45 449 IPR013057 -
Lele15g1471 463 PANTHER AMINO ACID TRANSPORTER 43 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1471 Lele-ChrLele15 8632998 8635756 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1471 1 463 Amino Acid or Auxin Permease AAAP Family AT3G30390 69.612 0.0 648
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g0998 13 21121525 21124266 Lele15g1471 15 8632998 8635756 hybridization
Lele14g0895 14 19502669 19505359 Lele15g1471 15 8632998 8635756 hybridization