Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1466 ATGTATTCTGCGGAATCTAGTGGCATAATCAAGTTGTCCACGTCAATGTACCTCTCTAGCACCAGTCTTCTGCAAGATGATTTCATTGTTTACATCAAGAGAGGTCAAACAATGGTTCGCCAAGCTACTTTAGTTATCATTGGTGTCACAGTTGGTGCGGCCTTTGGAATTTTTATCGCTTCCCTTATATTTTTTGGGATAAGGTGGTATAAGAAGCATGCTCGTCTTACACATCCTGCAAAAGAGAGTAGTTTAACCACTCTTCCAATTCGCACAAATGGATTAGGAACAAGCACTGACTTTAGTGTCTCTCTTAAAAGTTCCAAATCCAATTCGATGTCAGAAAATCTGCAAAGAAACTCCAATTTCTCTTGGTGGAGTCATCAAAACAAAGATCGATTTTCTCTGACACCTGGCATTTCAAAGTACTCATACAAAGAAATCCATAAGGCCACGCAGAATTTCACTACTATTTTGGGACAAGGATCATTTGGCACAGTTTATAAAGCCACAATGCCTACAGGAGAGGCGGTAGCTGTAAAGGTGCTTGACTCTAATTCTAAACAAGGGGAGAAAGAATTCCAAACAGAGGTGCTTTTGCTGGGAAGATTACATCATCGGAATCTTGTGAATTTAGTAGGATATTGTGTAGATAAAGGACAACGTATTTTGGTTTATGAGTTCATGAGCAATGGAAGTTTGTCAAACCTTTTATACAGTGAAGTAAAGGCTTTGAGTTGGAACGAAAGGCTTCAAATTGTTATTGATATTTCACATGGAATTGAATATCTTCATGAAGGAGCAGTCCCACCTGTTATACATCGTGATTTGAAGTCTGCCAATATATTGTTAGATCATTCAATGAGAGCTAAGGTTGCTGATTTTGGGTTGTCAAAGGAAGAGGTCTTTGATGGCCGGAATTCAGGCCTTAAAGGTACATACGGCTACATGGACCCAGCATACATTTCCACAAACAAGTTCACAATGAAGAGTGACATCTACAGTTTTGGTATCATCATTTTTGAGCTCATTACATCCATTCACCCACATCAAAATTTGTTGGAATATATTAACCTTGCTGCAATGGATCATGATGGAGTAGATGAGATACTTGACAAACAACTTGTAGGAAAATGCAACCTTGAAGAAGTAAGGCAGCTTGCTAAAATTGCTTACAAATGTTTGCACAGATCTCCTCGGAAACGCCCCTCCATTTGTGAGGTTTCACAGGGTATATTGAGAATAAAAGAAAGGCGCCTTGTGAAAGAAGATATCTTGTCATTTGCAGGCAGAAACTTCTCCAGAGCTTTGAGTCTAATAGAGGATCAACAAGTTGAATTAAATAGGATAACCACCATGAACCACAGAGAAACTGGATGA 1380 0.3906 MYSAESSGIIKLSTSMYLSSTSLLQDDFIVYIKRGQTMVRQATLVIIGVTVGAAFGIFIASLIFFGIRWYKKHARLTHPAKESSLTTLPIRTNGLGTSTDFSVSLKSSKSNSMSENLQRNSNFSWWSHQNKDRFSLTPGISKYSYKEIHKATQNFTTILGQGSFGTVYKATMPTGEAVAVKVLDSNSKQGEKEFQTEVLLLGRLHHRNLVNLVGYCVDKGQRILVYEFMSNGSLSNLLYSEVKALSWNERLQIVIDISHGIEYLHEGAVPPVIHRDLKSANILLDHSMRAKVADFGLSKEEVFDGRNSGLKGTYGYMDPAYISTNKFTMKSDIYSFGIIIFELITSIHPHQNLLEYINLAAMDHDGVDEILDKQLVGKCNLEEVRQLAKIAYKCLHRSPRKRPSICEVSQGILRIKERRLVKEDILSFAGRNFSRALSLIEDQQVELNRITTMNHRETG 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1466 459 FunFam Leucine-rich repeat receptor-like protein kinase 128 228 - -
Lele15g1466 459 Gene3D Phosphorylase Kinase; domain 1 114 228 - -
Lele15g1466 459 ProSiteProfiles Protein kinase domain profile. 153 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele15g1466 459 Pfam Protein tyrosine and serine/threonine kinase 155 409 IPR001245 GO:0004672|GO:0006468
Lele15g1466 459 SMART serkin_6 153 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele15g1466 459 SUPERFAMILY Protein kinase-like (PK-like) 123 409 IPR011009 -
Lele15g1466 459 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 40 417 - -
Lele15g1466 459 ProSitePatterns Serine/Threonine protein kinases active-site signature. 272 284 IPR008271 GO:0004672|GO:0006468
Lele15g1466 459 ProSitePatterns Protein kinases ATP-binding region signature. 159 181 IPR017441 GO:0005524
Lele15g1466 459 FunFam Calcium/calmodulin-regulated receptor-like kinase 2 229 436 - -
Lele15g1466 459 Gene3D Transferase(Phosphotransferase) domain 1 229 428 - -
Lele15g1466 459 CDD STKc_IRAK 159 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1466 Lele-ChrLele15 8578745 8582839 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1466 139 408 Receptor kinase-like Gene Family AT3G19300 41.935 2.22e-69 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Lele15g1466 PK_Tyr_Ser-Thr 5.1e-51 CL0016