Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1458 ATGATGGGTTCAGAGAAAGCGTGGAAGAAAGGGCCTTGGACTCTTGAAGAGGATAAGCTTCTCAGTGAATATGTGAGCTTGCATGGTGAAGGAAGGTGGAGTTCAGTGGCCAAGTTTACAGGGTTAAATAGGAGTGGGAAAAGTTGCAGGTTGAGGTGGGTGAACTATTTGAAGCCAGGCCTGAAGAAAGGCCACTTGACACCTCAAGAAGAAGCCATCATATTTGAAATCCATGCTATGCTGGGTAACAAGTGGTCTACAATAGCAAAATATTTGCCAGGTAGAACAGATAATGAGATCAAGAACTACTGGAGAACCCACTTCAAGAAGAAAGACCAATCCTCTCGTATTAATAAGAAGCGAGAGAAGAGAAGATCAAGAATTCTAAAACAGATGAAACAACAAGAGAAGCAGCAGCAGCAACAACAACAACCTCAACAGTACGATGTACAAAGCAGCATGTCGTCTCATGCAGAGTCAAACAATCAAACAAACGTGTCTGCTGGGACGTCTGTATTAGAAGATAACTACCATCCAGTTACAACCATGGAAGACCAATATAATTACTTGATGCCTTTCATGTACCAAGATTGCTTTCCATCCCCGTGGCCTGAAAATTCTACTGTAGAACAAGATGAAGGCTTGTTGGTTACGTTATGGAACCTTGACGAAGAAACACAAGCTCGTCACGGGGACAATAATCACCAGTTCAACGAAAATGCCATTCATCATCATAACCAAATTACAACTTCTTGTTTCGATGATATTTCCAACAACCTCTGCTTTGCAAAATACATGTCCGGCTGA 807 0.4201 MMGSEKAWKKGPWTLEEDKLLSEYVSLHGEGRWSSVAKFTGLNRSGKSCRLRWVNYLKPGLKKGHLTPQEEAIIFEIHAMLGNKWSTIAKYLPGRTDNEIKNYWRTHFKKKDQSSRINKKREKRRSRILKQMKQQEKQQQQQQQPQQYDVQSSMSSHAESNNQTNVSAGTSVLEDNYHPVTTMEDQYNYLMPFMYQDCFPSPWPENSTVEQDEGLLVTLWNLDEETQARHGDNNHQFNENAIHHHNQITTSCFDDISNNLCFAKYMSG 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1458 268 Gene3D - 66 111 - -
Lele15g1458 268 SMART sant 62 110 IPR001005 -
Lele15g1458 268 SMART sant 9 59 IPR001005 -
Lele15g1458 268 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 5 179 IPR044676 GO:0003700|GO:0006355|GO:0043565
Lele15g1458 268 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 112 IPR017930 -
Lele15g1458 268 MobiDBLite consensus disorder prediction 110 171 - -
Lele15g1458 268 MobiDBLite consensus disorder prediction 112 130 - -
Lele15g1458 268 Gene3D - 9 62 - -
Lele15g1458 268 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Lele15g1458 268 CDD SANT 67 108 IPR001005 -
Lele15g1458 268 FunFam Myb transcription factor 10 62 - -
Lele15g1458 268 SUPERFAMILY Homeodomain-like 8 104 IPR009057 -
Lele15g1458 268 CDD SANT 12 57 IPR001005 -
Lele15g1458 268 MobiDBLite consensus disorder prediction 133 171 - -
Lele15g1458 268 ProSiteProfiles Myb-like domain profile. 5 57 IPR001005 -
Lele15g1458 268 ProSiteProfiles Myb-like domain profile. 58 108 IPR001005 -
Lele15g1458 268 Coils Coil 118 139 - -
Lele15g1458 268 Pfam Myb-like DNA-binding domain 10 57 IPR001005 -
Lele15g1458 268 Pfam Myb-like DNA-binding domain 66 107 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1458 Lele-ChrLele15 8532429 8533421 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1458 9 236 MYB Transcription Factor Family AT3G30210 50.655 3.67e-69 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele15g1458 Myb_DNA-binding 2.3e-17 CL0123