Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1453 ATGGGTTTCTGTTTGATACCCGAAATTAGATCCCTCACGAAAGCAAGCTCCGGCATTCTATTTTTGTTCCTACTCACTTGCTTTTGCTTCCCTTCTGCAGAAGCTTATGATCCACTTGACCCGAATGGAAATATCACAATCAAATGGGATATCATCAGCTGGACCCCTGATGGTTATGTTGCTGTAGTTACTATGAACAACTTCCAACAATATCGTCACATTGCAGCACCAGGGTGGACTTTAGGATGGACATGGGCAAAGAAGGAGGTGATATGGAGTATGATAGGAGCACAGGCCACTGAACAAGGGGATTGTTCAAAATTTAAGGGAAACGTCCCACATTGCTGTAAAAAGAACCCAACAGTTGTAGATTTACTCCCAGGAACGCCTTACAATCAGCAAATTGCAAATTGCTGCAAAGGCGGGGTACTTGCCTCATGGGCACAGGACCCAACCAATGCGGTTGCTTCATTTCAGGTAAGTGTTGGCAGAGCTGGAACCACTAACAAAACAGTCAAGGTGCCCAAAAACTTCACCCTGAATGCGCCAGGACCAGGTTATACTTGTGGGCCAGGAAAAGTTGTGCCACCCACTAAATTCATACAAGCAGACAAAAGGAGAGTAACACAGGCACTCATGACATGGAATGTAACGTGTACGTATTCACAATTTCTAGCGCAGAAAACTCCTACTTGCTGCGTCTCCCTCTCTTCTTTCTATAATGATACTATTGTACCTTGCCCAACATGTTCATGTGGCTGTCGGGGCAACTCATCTTCCTGTGTAGAGCCAGGTTCACCCCATCTGGAATCAGTTGTTTCTGGAAAAAATGGTTTGACACCTTTGGTTCAATGTACTAGTCATATGTGCCCAATTCGAGTCCATTGGCATGTTAAGGTTAACTACAAGGAGTACTGGCGTGTTAAGATAACCATTACCAATTTTAATCACAGGATGAATTTTTCTGAGTGGAACTTGGTTGTTCAACACCCAAACCTTGACAATCTGACCCAACTTTTCAGTTTCAACTACAAGGGATTAACACCATACGGAGCAATAAACGATACAGCAATGCTCTGGGGAATTAAGTTCTACAATGATTTTCTAAACGAAGCTGGGCCTTCTGGTAATGTACAATCAGAGCTACTTTTTCGGAAGGATAAATCGACTTTCACTTTCGAGAAGGGCTGGGCTTTTCCTCGAAGGATCTATTTCAATGGTGACAATTGTGTGATGCCACCACCAGATGCATACCCTTGGTTGCCTAATGCAAGTTCCCGGCAAGAAGTTTCCATGCTCACCTTAATGATGTCTTGCTTGGTAGCCTTGGTCTTTTACAGATTTGCTTGA 1350 0.4378 MGFCLIPEIRSLTKASSGILFLFLLTCFCFPSAEAYDPLDPNGNITIKWDIISWTPDGYVAVVTMNNFQQYRHIAAPGWTLGWTWAKKEVIWSMIGAQATEQGDCSKFKGNVPHCCKKNPTVVDLLPGTPYNQQIANCCKGGVLASWAQDPTNAVASFQVSVGRAGTTNKTVKVPKNFTLNAPGPGYTCGPGKVVPPTKFIQADKRRVTQALMTWNVTCTYSQFLAQKTPTCCVSLSSFYNDTIVPCPTCSCGCRGNSSSCVEPGSPHLESVVSGKNGLTPLVQCTSHMCPIRVHWHVKVNYKEYWRVKITITNFNHRMNFSEWNLVVQHPNLDNLTQLFSFNYKGLTPYGAINDTAMLWGIKFYNDFLNEAGPSGNVQSELLFRKDKSTFTFEKGWAFPRRIYFNGDNCVMPPPDAYPWLPNASSRQEVSMLTLMMSCLVALVFYRFA 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1453 449 PANTHER PROTEIN COBRA 24 439 IPR006918 GO:0010215|GO:0016020
Lele15g1453 449 PIRSF COBRA 9 449 IPR006918 GO:0010215|GO:0016020
Lele15g1453 449 Pfam COBRA-like protein 59 222 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1453 Lele-ChrLele15 8489130 8492465 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1453 1 446 COBRA Gene Family AT3G02210 72.062 0.0 685
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g1017 13 21262160 21263727 Lele15g1453 15 8489130 8492465 hybridization
Lele14g0915 14 19648624 19655479 Lele15g1453 15 8489130 8492465 hybridization