Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1452 ATGGTTTTCTGTTCGAAAGCAAGCATTCTAGTTTGTTTCTTACTGGTTTGCTTTCACTTGCCTTCTACAGAAGCTTATGATCCGGTTGACCCGAATGGGAATATCACAATCAAATGGGACGTCATCAACTGGACCGCTTATGGTTATGTTCAAATTCCACATTGCTGCAAAGGTGGTGTACTCAGCTCATTGATACAGGATCCAACCAATGCGGTTGCTTCATTTCAGGTAACCGTTGGCAATGCCGGAACCAATTACAGAACAGCCAAGGTGCCCAAAAACTTCACCTTGAATGCACCAGGACCAGGATATACTTGTGGACCAGAAAAAATTGTGAAACCCACTAAATTCGTAACATCAGACAAAAGGAGAACAATACAAGCACTCAATGATACAGCAATTCTATGGGGAATGAAGTTCTACAATGATGCTGTTAACCAAGCAGGCCCTTCCGGTAATGTGCAGACAGAGCTACTTTTTGGAAAGGACAAATCAAACTTGAGTTTGGAGAAGGGATGGGCTTTTCCTCAGAGGATATTCTTCAATGGTGACAGATGTATGATGCCACCACCAGATGCACATCCTTTGACTTTGTTGACCAATGCCAGTTCCCGACAACAAGCAACTCTCATTTCGACCAGATCGTTTTTGAGAACTAGCTCAGATACCTTGTGTTTTGCTACTCAGTTTCAACCAGAAGCTTATGATCCAGTTGATCCAAATGGAAATATTACAATCAAATGGGATGTCATCAGCTGGACCCCTGACTGTTATGTTCAAGTTGGAAATTGCTGCAAAGGTGGTGTTCTCAGTACAAGGGCTCAGGATCCAACAGACGCGGTTGCTTCATTTCAGGTAAGTGTTGGCAATGCTGGAACCACTAAAAAAACAGTCAAGCTGCCCAAAAACTTCACACTGAATGCACCAGGACCAGGTTATACTTGTGGTCCACCAAAAATTGTGAAACCCACTCTATTCATAACACCAGACAAAAGGAGAGTAACACAAGCACTCGTGACCTGGAATGTGGTATGCACTTATTCACAATTTCTAGCTCATAAAGCACCTACTTGCTGTGTCTCCCTCTCTTCTTTCCATAATGATACAATTGTACCCTGCCCAACGTGTTCATGTGGTTGCCGGGGGAACTCATCTAGCTGTGCAAAGTCAGGTTCAGCTCATTCGAAACCTGTGGTTCAATGTACTAATCATATGTGCCCGATCCAAGTCCAATGGCATGTTAAGGCTAACTACAAGGATTACTGGCGAGCTAAGATCACTGTTACCAATTTTAATTATGGGATGAATTATTCTGAGTGGAACTTGGCTGTTCAACACCCCAACTTTGACAATCTGGCCCAACATTTCGGTTTCAACTACAAGGGATTGACATTGAGCCGAGCAATAAACGACACAGCAATGCTTTGGGGAATTAAGTTGTACAATGATGTTCTGAACCAAGCAGGCCTTTCTGGTAATGTACAAGGAGAGCTACTTTTTGGAAAGGATAAATCAAGCTTCAGGTTGAAAAGGGGCTGGGGTTTTCCTCAGAGGATATATTTCAATGGTGACAATTGTGTGATGCCGCCACCAGATGCATACCCTTTGTTGCCCAAGGCCGTTTCTCCAATTGAGAATTAA 1641 0.4321 MVFCSKASILVCFLLVCFHLPSTEAYDPVDPNGNITIKWDVINWTAYGYVQIPHCCKGGVLSSLIQDPTNAVASFQVTVGNAGTNYRTAKVPKNFTLNAPGPGYTCGPEKIVKPTKFVTSDKRRTIQALNDTAILWGMKFYNDAVNQAGPSGNVQTELLFGKDKSNLSLEKGWAFPQRIFFNGDRCMMPPPDAHPLTLLTNASSRQQATLISTRSFLRTSSDTLCFATQFQPEAYDPVDPNGNITIKWDVISWTPDCYVQVGNCCKGGVLSTRAQDPTDAVASFQVSVGNAGTTKKTVKLPKNFTLNAPGPGYTCGPPKIVKPTLFITPDKRRVTQALVTWNVVCTYSQFLAHKAPTCCVSLSSFHNDTIVPCPTCSCGCRGNSSSCAKSGSAHSKPVVQCTNHMCPIQVQWHVKANYKDYWRAKITVTNFNYGMNYSEWNLAVQHPNFDNLAQHFGFNYKGLTLSRAINDTAMLWGIKLYNDVLNQAGLSGNVQGELLFGKDKSSFRLKRGWGFPQRIYFNGDNCVMPPPDAYPLLPKAVSPIEN 546
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1452 546 Pfam COBRA-like protein 50 130 IPR006918 GO:0010215|GO:0016020
Lele15g1452 546 Pfam COBRA-like protein 259 348 IPR006918 GO:0010215|GO:0016020
Lele15g1452 546 PANTHER PROTEIN COBRA 260 541 IPR006918 GO:0010215|GO:0016020
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele15g1452 Lele-ChrLele15 8480944 8486482 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1452 260 542 COBRA Gene Family AT3G02210 66.107 4.55e-142 416