LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele15g1452	ATGGTTTTCTGTTCGAAAGCAAGCATTCTAGTTTGTTTCTTACTGGTTTGCTTTCACTTGCCTTCTACAGAAGCTTATGATCCGGTTGACCCGAATGGGAATATCACAATCAAATGGGACGTCATCAACTGGACCGCTTATGGTTATGTTCAAATTCCACATTGCTGCAAAGGTGGTGTACTCAGCTCATTGATACAGGATCCAACCAATGCGGTTGCTTCATTTCAGGTAACCGTTGGCAATGCCGGAACCAATTACAGAACAGCCAAGGTGCCCAAAAACTTCACCTTGAATGCACCAGGACCAGGATATACTTGTGGACCAGAAAAAATTGTGAAACCCACTAAATTCGTAACATCAGACAAAAGGAGAACAATACAAGCACTCAATGATACAGCAATTCTATGGGGAATGAAGTTCTACAATGATGCTGTTAACCAAGCAGGCCCTTCCGGTAATGTGCAGACAGAGCTACTTTTTGGAAAGGACAAATCAAACTTGAGTTTGGAGAAGGGATGGGCTTTTCCTCAGAGGATATTCTTCAATGGTGACAGATGTATGATGCCACCACCAGATGCACATCCTTTGACTTTGTTGACCAATGCCAGTTCCCGACAACAAGCAACTCTCATTTCGACCAGATCGTTTTTGAGAACTAGCTCAGATACCTTGTGTTTTGCTACTCAGTTTCAACCAGAAGCTTATGATCCAGTTGATCCAAATGGAAATATTACAATCAAATGGGATGTCATCAGCTGGACCCCTGACTGTTATGTTCAAGTTGGAAATTGCTGCAAAGGTGGTGTTCTCAGTACAAGGGCTCAGGATCCAACAGACGCGGTTGCTTCATTTCAGGTAAGTGTTGGCAATGCTGGAACCACTAAAAAAACAGTCAAGCTGCCCAAAAACTTCACACTGAATGCACCAGGACCAGGTTATACTTGTGGTCCACCAAAAATTGTGAAACCCACTCTATTCATAACACCAGACAAAAGGAGAGTAACACAAGCACTCGTGACCTGGAATGTGGTATGCACTTATTCACAATTTCTAGCTCATAAAGCACCTACTTGCTGTGTCTCCCTCTCTTCTTTCCATAATGATACAATTGTACCCTGCCCAACGTGTTCATGTGGTTGCCGGGGGAACTCATCTAGCTGTGCAAAGTCAGGTTCAGCTCATTCGAAACCTGTGGTTCAATGTACTAATCATATGTGCCCGATCCAAGTCCAATGGCATGTTAAGGCTAACTACAAGGATTACTGGCGAGCTAAGATCACTGTTACCAATTTTAATTATGGGATGAATTATTCTGAGTGGAACTTGGCTGTTCAACACCCCAACTTTGACAATCTGGCCCAACATTTCGGTTTCAACTACAAGGGATTGACATTGAGCCGAGCAATAAACGACACAGCAATGCTTTGGGGAATTAAGTTGTACAATGATGTTCTGAACCAAGCAGGCCTTTCTGGTAATGTACAAGGAGAGCTACTTTTTGGAAAGGATAAATCAAGCTTCAGGTTGAAAAGGGGCTGGGGTTTTCCTCAGAGGATATATTTCAATGGTGACAATTGTGTGATGCCGCCACCAGATGCATACCCTTTGTTGCCCAAGGCCGTTTCTCCAATTGAGAATTAA	1641	0.4321	MVFCSKASILVCFLLVCFHLPSTEAYDPVDPNGNITIKWDVINWTAYGYVQIPHCCKGGVLSSLIQDPTNAVASFQVTVGNAGTNYRTAKVPKNFTLNAPGPGYTCGPEKIVKPTKFVTSDKRRTIQALNDTAILWGMKFYNDAVNQAGPSGNVQTELLFGKDKSNLSLEKGWAFPQRIFFNGDRCMMPPPDAHPLTLLTNASSRQQATLISTRSFLRTSSDTLCFATQFQPEAYDPVDPNGNITIKWDVISWTPDCYVQVGNCCKGGVLSTRAQDPTDAVASFQVSVGNAGTTKKTVKLPKNFTLNAPGPGYTCGPPKIVKPTLFITPDKRRVTQALVTWNVVCTYSQFLAHKAPTCCVSLSSFHNDTIVPCPTCSCGCRGNSSSCAKSGSAHSKPVVQCTNHMCPIQVQWHVKANYKDYWRAKITVTNFNYGMNYSEWNLAVQHPNFDNLAQHFGFNYKGLTLSRAINDTAMLWGIKLYNDVLNQAGLSGNVQGELLFGKDKSSFRLKRGWGFPQRIYFNGDNCVMPPPDAYPLLPKAVSPIEN	546

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele15g1452	546	Pfam	COBRA-like protein	50	130	IPR006918	GO:0010215\|GO:0016020
	Lele15g1452	546	Pfam	COBRA-like protein	259	348	IPR006918	GO:0010215\|GO:0016020
	Lele15g1452	546	PANTHER	PROTEIN COBRA	260	541	IPR006918	GO:0010215\|GO:0016020

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele15g1452	Lele-ChrLele15	8480944	8486482	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele15g1452	260	542	COBRA Gene Family	AT3G02210	66.107	4.55e-142	416