Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1451 ATGGCAGCCTCCGATTCGCGAGCCCACTCGTTCGGCCAGACTGAGATTAACTGGGACAAGCTAGATAAAACCAAGTTCTATGTTGTAGGAGCTGGACTCTTTACAGGTGTCACATTGGCACTCTACCCAGTTTCTGTAGTGAAGACTAGACTGCAGGTTGCCTCGAGGGATGCTGCAGAGAGAAATGCATTTTCTGTTATAAAGGGATTACTTAGAACAGATGGCGCTCCCGGTCTGTATAGAGGATTTGGCACAGTCATCACTGGTGCAGTTCCTGCCAGAATCATATTTCTTACTACCCTAGAGACCACTAAGGTGACCGCCTTCAGGATGGTCGAACCATTTAGACTCTCCGAAACCACCCAGGCAGCCATAGCAAATGGAGCTGCGGGCTTGACATCGTCACTTTTAGCTCAAGCTGTGTTTGTTCCAATTGATGTGGTGAGCCAAAAGTTGATGGTGCAAGGATACTCAGGTCATGCCCAATATAATGGCGGTCTGGATGTTGCTCGTAAAGTGTTAAGATCCGATGGCATCCGGGGATTATATAGAGGATTCGGTCTTTCTGTTATGACTTATGCTCCTTCCAGTGCTGTATGGTGGGCAAGCTATGGTTCAAGCCAACGCTTAATTTGGAGATTCTTGGAACGAAGTGCTGAAAATAAGGAAGGCAAACCCAGTGTGCAGAAAATCGTGTTAGTTCAGGCTACTGGAGGAATCATTGCTGGTGCAACTGCATCCTGCATTACAACACCATTGGATACTATTAAGACACGATTACAGGTGATGGGACATGAAAATAAAAGCTCTGTGAAACAAGTTGTCAAAGACTTGATAAACGAGGATGGTTGGAAAGGTTTATACAGAGGGTTAGGCCCAAGATTTTTCAGCATGTCGGCATGGGGTACTTCAATGATATTGGCTTATGAATATCTGAAGCGCTTGTGCGCAAAAGATGAATAG 963 0.4569 MAASDSRAHSFGQTEINWDKLDKTKFYVVGAGLFTGVTLALYPVSVVKTRLQVASRDAAERNAFSVIKGLLRTDGAPGLYRGFGTVITGAVPARIIFLTTLETTKVTAFRMVEPFRLSETTQAAIANGAAGLTSSLLAQAVFVPIDVVSQKLMVQGYSGHAQYNGGLDVARKVLRSDGIRGLYRGFGLSVMTYAPSSAVWWASYGSSQRLIWRFLERSAENKEGKPSVQKIVLVQATGGIIAGATASCITTPLDTIKTRLQVMGHENKSSVKQVVKDLINEDGWKGLYRGLGPRFFSMSAWGTSMILAYEYLKRLCAKDE 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1451 320 ProSiteProfiles Solute carrier (Solcar) repeat profile. 122 210 IPR018108 -
Lele15g1451 320 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 4 319 - -
Lele15g1451 320 Gene3D Mitochondrial carrier domain 27 320 IPR023395 -
Lele15g1451 320 PRINTS Mitochondrial carrier protein signature 39 53 IPR002067 GO:0055085
Lele15g1451 320 PRINTS Mitochondrial carrier protein signature 183 201 IPR002067 GO:0055085
Lele15g1451 320 PRINTS Mitochondrial carrier protein signature 239 261 IPR002067 GO:0055085
Lele15g1451 320 FunFam Mitochondrial substrate carrier family protein 27 319 - -
Lele15g1451 320 Pfam Mitochondrial carrier protein 31 106 IPR018108 -
Lele15g1451 320 Pfam Mitochondrial carrier protein 125 211 IPR018108 -
Lele15g1451 320 Pfam Mitochondrial carrier protein 234 319 IPR018108 -
Lele15g1451 320 ProSiteProfiles Solute carrier (Solcar) repeat profile. 230 315 IPR018108 -
Lele15g1451 320 SUPERFAMILY Mitochondrial carrier 19 312 IPR023395 -
Lele15g1451 320 ProSiteProfiles Solute carrier (Solcar) repeat profile. 23 107 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1451 Lele-ChrLele15 8476150 8479360 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1451 16 320 Chloroplast and Mitochondria Gene Families AT5G15640 76.873 1.35e-174 484
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g1018 13 21264451 21267640 Lele15g1451 15 8476150 8479360 hybridization
Lele14g0916 14 19656400 19659375 Lele15g1451 15 8476150 8479360 hybridization