Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1446 ATGTCCAGCAAGGCGTCAAAATCTATGAAGAACAACGAGAAAACAGATTTGCAGAAGCAGATTGGGTGCATCACTGGATTGTTTCAGCTCTTTGACCGTCACCGTTTCCTCGCAGGTGGAAGCAATGATCAAATCAGAGAGCTTAGTACTACAATGCCGAAAGCCAAGGCAAAAAATCTCAAGGCTGCCAGAGAGAAGCAACAATTCCCCACAAAATCATCAATCAGTTGTGTGTCTACTTCATCTTGTTCCTCTAGCATGTCATCTGTTGATTTTAGCAGAACAGTTCAGGTAGAAGCATCATCAATCCCTCATATAAAAGTTCCAGGAATCCCAACTTCAGAAGCAGCACCAAAGCAACTTGAAAACCCAGGTCGTCGTCAATCTCGTGATTCACGAGCTAATGTCAGAGATTCAAAGCATAGAGAAGCTCAGGGACTAACAGTGAAAACTGTGGCTAAAGAGGGAAAGAAGGGAGGTCATACCTTGAAATACATAGACTCCCCCAGGCCTGAACCTTTTCAGGCTTCCAAATCTGCCAATGCAGGAGTTATGGCTGCCAAAGAACCCTTGCACATTCTTCCAAGGTCCCAGAAAGCTCCATGGGATTCACCACGACTTTCTTATGATGAAAGGTTTACACAAGATACATTCAAATCAACCGCCAGGCACAAGGAACTCCCAAGGCTTTCCTTGGACAGCAGAGCAGGATCCGTTAGAAGTTTGAATGAAGGCGCAAAATCTCGCAATCTTCTTAAGGGTCCACAGAAAGGGTATGGAAGTTGCAGCGCAATGGTTAATCAGCTGCAAGAGCCAGAAACCTCGCGAAGACAATCCAGTGTTGTGGCAAAGTTAATGGGACTGGATGACTTCCCAGACTGCACACAAACTCGTGAGCCTATGGAGACTTCGAGCTGCCCCACCAATAAAAAGGAGACCCTATCAAGAGATAGCACAAGTGATGAACGCAAGCAGCACCAAAATTATGGATCCCCCAGAATATGCAAGGGGTCCACCTTGCTCCACCATGTGAGGACTGATTCGACCTTGAGTGACACGTCATATTTGTCATTCTTGCAAGAACCCACTCGAGGGAGACAACCTGACGCAAGCCAAGGATCCCAATTTTCAGATTCCAAGGACACGGAATCTGCAATAAAGGCCTCAAATTCCTCCCAATCTGTATATGCGGAAGTTGAGAAAAGGCTGGCAGAGCTCGAGTTTAAAAAGTCAGGAAAGGATCTCAGAGCCCTCAAACAGATTCTTGAAGCCATGCAGAGATATAACCATTCATTAGATATAACAAGAGATCAGGCTTCAAATTGTCCATCTGACAAGATGAGTACCAGCAGTCTCAGTGAAAGCTCAAAAGTACAGAGCCCCAGAAACCGACAAAAGGACCCAAAATCTATCTCAACAAATAGGTCAAATTCACCCCGCGAGAGTAAATTGCCAATTGTCATCATGACACCAGCAAGAGTTAAAAGAATTTCAGCATCCCCAGAAATGTCAATTCATGGTAAATCTGGCCCCAGCGAGTTCTCACCTTGTAATCCCAGAAGCAGAAGATTGGTTGACAGGCAAAAAGATAAATCTATCACTCCAAAGATCAGACATCTAAATGATCCTTCAAGTCAAGCCCCTCATTCAGCGGACAAGAGTGATAAAATAACAACCTCGAAAATGATGGAAGCCAGAGTTCGTCGACACATCGACGGAGAAAACGTCAGCTCTGGTAATAAAACAGAGATTGAAAGCCCAAGACTACACAAAAAGTTTGGTTGGGAGAGGCGTTCTCTGCCAAATTCATGTTCCAGCAGTGACAGAAGATGGCACAATAGGCGGTCTCTAGAATTATCCTCCCCCAGTACAACAAGAAGACCAAAATTCTCAACTTTGCATGAAGCAAATGAACGTTTCAGTACGACCATCTGTCCAAGAAAGGGTTTGAAGGATAATGTTGATGTCATTTCTCCAGATTCTTACACAAATAAAAGGTCGGTCACTCATAGCAACATCAGAGTCATTCCCACGGATCAATCAGAGATCAGCAGAATCTCCTTCCTACTAGATGACCTGAATCCCAATAAAGCAGCTAAAGGGTTGGGTAATGAAAGCTCTCCGTCTGAAACAACAGTTATCACAGAACAACCAAGTCCTATCTCAGTTCTCGATGCTACATTCTACAGAGAAGACCCACCATCTCCAATAAAAAAGAAATCAGACATCTCGAAAGATTCAGATGCAGCTCAAAATGCTGATGATGAAAAGGAGGAGAACTCATCAGATCTTACCAGCCCCACAAAATACAACGTCAGCAATTGGGCAAGTGATGGAGACTTAAACACTCAGTATTTGGTCCAAAAACTTCAAAAAACTGACTGCCCCCATGATGAAGCCATCGATTTCATTGGACCACTCAGTGACAGTAAAGATCCTGATCATCAATACATCTCTGAAATAATGTTCGCATTAGATCTGATCAGTAGCCCAGGCTCTAGCAAGAGATCAGCCCACCTGAATGGCACAAAGTTGTTCCTCGCACTAGAACAAATAAAGACAAAGAAGAGGCCTTGTGACATTGAAGACAATCCCAAGACAAAGGGGCAAATGCAAAGAAAACTCGTATTTGATGTTGTTTATGATATTTTAGTTCAAAAGCTGATATTGGAGAGTTCCCCTTGTCAGTGGTTCCTTCCACAAGAGTTGGTGGCCAGAAAACTAAGAGGACAGCAGCTTCTATGTGAAATTTGCTCAGAATTTGACAAGTTGCGTCATGAAAATAAGAATGCCAGTCTGACTAATGAGGATGAGAATTTGACAAGTCTCTTGTGGGGAGATTTGATGCATCAGCCCACAACTTGGACAAACTGCAGCAGTGAGATTCCAGATATAGTGTTAGATATTGAACGGTTGATCTTTAAAGATTTGATAACCGAAGTTGTAAGAGGTGAAGTAGCAAATCATCCTGGCAAGCATTGCAGACAACTGCTGTTTCCCAAGTAG 3006 0.4351 MSSKASKSMKNNEKTDLQKQIGCITGLFQLFDRHRFLAGGSNDQIRELSTTMPKAKAKNLKAAREKQQFPTKSSISCVSTSSCSSSMSSVDFSRTVQVEASSIPHIKVPGIPTSEAAPKQLENPGRRQSRDSRANVRDSKHREAQGLTVKTVAKEGKKGGHTLKYIDSPRPEPFQASKSANAGVMAAKEPLHILPRSQKAPWDSPRLSYDERFTQDTFKSTARHKELPRLSLDSRAGSVRSLNEGAKSRNLLKGPQKGYGSCSAMVNQLQEPETSRRQSSVVAKLMGLDDFPDCTQTREPMETSSCPTNKKETLSRDSTSDERKQHQNYGSPRICKGSTLLHHVRTDSTLSDTSYLSFLQEPTRGRQPDASQGSQFSDSKDTESAIKASNSSQSVYAEVEKRLAELEFKKSGKDLRALKQILEAMQRYNHSLDITRDQASNCPSDKMSTSSLSESSKVQSPRNRQKDPKSISTNRSNSPRESKLPIVIMTPARVKRISASPEMSIHGKSGPSEFSPCNPRSRRLVDRQKDKSITPKIRHLNDPSSQAPHSADKSDKITTSKMMEARVRRHIDGENVSSGNKTEIESPRLHKKFGWERRSLPNSCSSSDRRWHNRRSLELSSPSTTRRPKFSTLHEANERFSTTICPRKGLKDNVDVISPDSYTNKRSVTHSNIRVIPTDQSEISRISFLLDDLNPNKAAKGLGNESSPSETTVITEQPSPISVLDATFYREDPPSPIKKKSDISKDSDAAQNADDEKEENSSDLTSPTKYNVSNWASDGDLNTQYLVQKLQKTDCPHDEAIDFIGPLSDSKDPDHQYISEIMFALDLISSPGSSKRSAHLNGTKLFLALEQIKTKKRPCDIEDNPKTKGQMQRKLVFDVVYDILVQKLILESSPCQWFLPQELVARKLRGQQLLCEICSEFDKLRHENKNASLTNEDENLTSLLWGDLMHQPTTWTNCSSEIPDIVLDIERLIFKDLITEVVRGEVANHPGKHCRQLLFPK 1001
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1446 1001 MobiDBLite consensus disorder prediction 435 560 - -
Lele15g1446 1001 MobiDBLite consensus disorder prediction 297 313 - -
Lele15g1446 1001 MobiDBLite consensus disorder prediction 732 763 - -
Lele15g1446 1001 MobiDBLite consensus disorder prediction 520 537 - -
Lele15g1446 1001 MobiDBLite consensus disorder prediction 56 87 - -
Lele15g1446 1001 MobiDBLite consensus disorder prediction 104 145 - -
Lele15g1446 1001 MobiDBLite consensus disorder prediction 598 629 - -
Lele15g1446 1001 MobiDBLite consensus disorder prediction 700 718 - -
Lele15g1446 1001 MobiDBLite consensus disorder prediction 124 145 - -
Lele15g1446 1001 MobiDBLite consensus disorder prediction 723 775 - -
Lele15g1446 1001 MobiDBLite consensus disorder prediction 290 335 - -
Lele15g1446 1001 MobiDBLite consensus disorder prediction 66 87 - -
Lele15g1446 1001 Pfam Domain of unknown function (DUF4378) 814 980 IPR025486 -
Lele15g1446 1001 MobiDBLite consensus disorder prediction 314 329 - -
Lele15g1446 1001 MobiDBLite consensus disorder prediction 361 395 - -
Lele15g1446 1001 MobiDBLite consensus disorder prediction 435 483 - -
Lele15g1446 1001 PANTHER LONGIFOLIA PROTEIN 1 997 IPR033334 GO:0051513
Lele15g1446 1001 MobiDBLite consensus disorder prediction 699 718 - -
Lele15g1446 1001 MobiDBLite consensus disorder prediction 568 587 - -
Lele15g1446 1001 MobiDBLite consensus disorder prediction 538 553 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1446 Lele-ChrLele15 8456725 8461159 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1446 131 996 TRM (TON1 Recruiting Motif) Superfamily AT1G74160 29.851 1.95e-62 227