Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1442 ATGATTAAGATTCCGAAAGAGCAATCAGATGTTCCCAGAAAACAGGAAGATTCATCAAGTAATTATGCGAAAGCAAAGGCATCATCATCATGGAGCAGCATGGAACAGCAATGGGTGAGGTTGAAGGATCCGAGGATAGTGAGGGTGGCAAGATCCTGTGGGGGCAAAGACAGGCACAGCAAGGTTTGCACCATACGAGGTTTGAGAGACAGAAGAGTGAGGTTGTCGGTTCCTACAGCCATTCAATTGTATGATCTTCAAGAGAGGCTAGGGTTCAACCAACCCAGTAAGGTCATTGATTGGCTTCTTGATGCTGCCAAGAATGACATTGATGAACTTCCTCCTCTTCCACCATTAAATCTGGCCCTGCTTCATCATCATGCTATTCTCACCTCTAATAATAATTCTCAGCCTAACAAAGAAGAAGAAGCTGCAGGTGGTGGGTGGGAAGCTTCCAACAATAACACTACTTTCTGGAAATTGATAGAGCCCAAAGAAGCTTCCTCGTCTCATGAAGACAATGTTAAACAAGGAAGCAATAACGATAATGATCAGTTATCTCATCATGCTGTACAAGTTGTTCCCCATCATCATCATCATCCCTCGTTTGTTGGGTACCAGTGGGAAGGTTCTGGATCAGGTGATCATGTTTCTCACCAGAGAGATTTGCAAAGCATTAACGTTGCACCTTTCTCATCAACTTTGTCTTTGTCCACTGGGGATTCTTCTCATCATCATCATCATCATCATCATTTTGCTTCACATTTTGGAGCGAATATGGACATGGATCATAATAATATGCCAAGACAAGTCAACTATAATAACCAGCACTATCCCATGATGCTGCAGGGTGCTAGTTCAAATCTGTACCCTATCTCCATGGCACAATCCTTGAATAAACCCTTTGGGTTAAGCATGATGACTCATAACAACACTTCAGATCATCAGAGCCATCATCAGTCACAAAACCACCTTCAGAATTTTCCCACCAAATGA 996 0.4277 MIKIPKEQSDVPRKQEDSSSNYAKAKASSSWSSMEQQWVRLKDPRIVRVARSCGGKDRHSKVCTIRGLRDRRVRLSVPTAIQLYDLQERLGFNQPSKVIDWLLDAAKNDIDELPPLPPLNLALLHHHAILTSNNNSQPNKEEEAAGGGWEASNNNTTFWKLIEPKEASSSHEDNVKQGSNNDNDQLSHHAVQVVPHHHHHPSFVGYQWEGSGSGDHVSHQRDLQSINVAPFSSTLSLSTGDSSHHHHHHHHFASHFGANMDMDHNNMPRQVNYNNQHYPMMLQGASSNLYPISMAQSLNKPFGLSMMTHNNTSDHQSHHQSQNHLQNFPTK 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1442 331 MobiDBLite consensus disorder prediction 306 331 - -
Lele15g1442 331 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 15 322 IPR005333 GO:0003700
Lele15g1442 331 MobiDBLite consensus disorder prediction 1 28 - -
Lele15g1442 331 Pfam TCP family transcription factor 55 179 IPR017887 -
Lele15g1442 331 MobiDBLite consensus disorder prediction 193 220 - -
Lele15g1442 331 MobiDBLite consensus disorder prediction 1 20 - -
Lele15g1442 331 MobiDBLite consensus disorder prediction 132 152 - -
Lele15g1442 331 ProSiteProfiles TCP domain profile. 55 113 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1442 Lele-ChrLele15 8421494 8422489 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1442 6 127 TCP Transcription Factor Family AT3G02150 57.463 6.82e-47 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lele15g1442 TCP 2.4e-28 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g1026 13 21316327 21317325 Lele15g1442 15 8421494 8422489 hybridization
Lele14g0927 14 19721026 19722027 Lele15g1442 15 8421494 8422489 hybridization