Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1422 ATGTTTCTTGAATCGGGATTCTCCATTACTGGGCCTCCAGCAACTTCACAAGTAAGGTTGACCTCGGATCCATTTCAACGCAAACTGCTACACTGCTTTTCAATCTTCATCACACCCTCAATCTTCTACTGGAACTCAAGTATTTTATGTTGCCACGGAGCGGAACCTGAGGTGAACCCTCCTGGTGTTACTTCCTATGCCCCCTTGACCTCCGATTCAGTTAGTCATCTGACTCATGAAGCCAACGTTGATTACTCGTATACTCACAACCCTATTGCAGATTCGAGCTCCGGATACTATTTTGACCCGAATGGTCAAAATTGGGCTGCTAGGGAGGCTGTTAAGCAGTTCGGGGTGGACCCGGTTGGCTATGTAGCTCCTATCCCCGTAGCTTCTACTGGATCAGAGCAATTGGCTACTACTGCAAATGCTAACTCCGCTTGGTGGGCTCACACCGTAACCCAACCTCATGGAAATGGGGCACGGAAGAAACCCCTGAAGAAACTGAAAACTAAGGTTGTCCAATCTGCATATTGTGAAGTTTGCAAGATAGATTGTACTGGCAAGGATGTTCTGGACCAGCATAAGTTAGGAAAGAAGCACAAGAAGAAATTGGAGAAATTAAAAGAAGCATTAAGGCCACCAAAAGTTCCTGTTCTGCCACCCGCCGCGTCATCTAATCCTTTGATAGGACTTCAACCGGAGGGAACCAAGAGCAAATCTGGGAGCGAGAGTAAAAGGAAAGCGATTGAAACACCAGAAGATTTAGAGAAGAAGAAAAAGAAGGTTCTTAAAGGTGGGGCAGCCGCAGAAGCAGTTAAAATATGTACTATTTGTAATGTGGTCTGTAATAGCGACACTGTATTTAATTATCATCTTGCAGGGCAAAAGCATGCTGTTATGATGAAGAAACAAGCTTCTTGA 924 0.4502 MFLESGFSITGPPATSQVRLTSDPFQRKLLHCFSIFITPSIFYWNSSILCCHGAEPEVNPPGVTSYAPLTSDSVSHLTHEANVDYSYTHNPIADSSSGYYFDPNGQNWAAREAVKQFGVDPVGYVAPIPVASTGSEQLATTANANSAWWAHTVTQPHGNGARKKPLKKLKTKVVQSAYCEVCKIDCTGKDVLDQHKLGKKHKKKLEKLKEALRPPKVPVLPPAASSNPLIGLQPEGTKSKSGSESKRKAIETPEDLEKKKKKVLKGGAAAEAVKICTICNVVCNSDTVFNYHLAGQKHAVMMKKQAS 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1422 307 MobiDBLite consensus disorder prediction 210 254 - -
Lele15g1422 307 SUPERFAMILY beta-beta-alpha zinc fingers 156 209 IPR036236 -
Lele15g1422 307 SMART ZnF_U1_5 271 305 IPR003604 GO:0003676|GO:0008270
Lele15g1422 307 SMART ZnF_U1_5 174 208 IPR003604 GO:0003676|GO:0008270
Lele15g1422 307 Gene3D Classic Zinc Finger 247 306 - -
Lele15g1422 307 Gene3D Classic Zinc Finger 161 208 - -
Lele15g1422 307 MobiDBLite consensus disorder prediction 240 254 - -
Lele15g1422 307 Pfam Zinc-finger of C2H2 type 178 201 - -
Lele15g1422 307 Pfam Zinc-finger of C2H2 type 275 298 - -
Lele15g1422 307 PANTHER ZINC FINGER PROTEIN 385B-LIKE 102 306 - -
Lele15g1422 307 SUPERFAMILY beta-beta-alpha zinc fingers 272 305 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1422 Lele-ChrLele15 8292288 8294724 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1422 179 304 C2H2 Transcription Factor Family AT5G61190 27.536 1.03e-06 48.5