Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1411 ATGGATCACATCTCAACCGCAAGATCACTTCAAGGGTGGAGAGAAGGCTTGATGAATTTGGCTGGAGAGGATCCATATCCATTTCATGCTTCTTTTGTCACAGGGCAATTAATTCCAAGTGTTTCTAGCGGACAAGGGATAAACAGCCAGGTATTCTGGGGACTGCTTCTTTCCCCTAGAGAGGGTATCTGGAAGGCGCCGAAGAGTGAAGAATCAATGGCGAATCTGAAGAAGTATTTTGGGTTGCTTCTTGTGGTGTGCGTTGGGCTTGTGACGTTGCCGGAGGCGTCGGCGACGAGGTGGACTGTCGGAGGCAAAATGGGCTGGAGCCCCAATGTGAACTACACTGTTTGGGCTCGGGACAAGCACTTCTACAATGGCGACTGGCTCTTTTTTGTGTACGATAGGAACCAGCAGAGCGTACTGGAGGTGAACAAGACTAACTACGAGACATGCAACATAGATCATCCACTTCACAACTACACTACAGGAGCTGGAAGAGACGTGGCTCCTCTGAATGTAACTCGCGATTACTACTTTGTGAGTGGAAATGGATTCTGCTATGGGGGAATGAAGGTTCACATTCATGTGCAAAAACCACCCCCACCACCTGTAGCTTCTCCCGAAAAAGCTGCTTCTTCCACTCTCTCTTCATCAGGTCTTGTTCTTCTGTTGCCTGTAGCGTTTGCCATTGGAGCGGCTTGGGATGCTTTCTTTCGTTTCTGGTGA 729 0.4897 MDHISTARSLQGWREGLMNLAGEDPYPFHASFVTGQLIPSVSSGQGINSQVFWGLLLSPREGIWKAPKSEESMANLKKYFGLLLVVCVGLVTLPEASATRWTVGGKMGWSPNVNYTVWARDKHFYNGDWLFFVYDRNQQSVLEVNKTNYETCNIDHPLHNYTTGAGRDVAPLNVTRDYYFVSGNGFCYGGMKVHIHVQKPPPPPVASPEKAASSTLSSSGLVLLLPVAFAIGAAWDAFFRFW 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1411 242 Gene3D - 97 200 IPR008972 -
Lele15g1411 242 ProSiteProfiles Phytocyanin domain profile. 99 199 IPR003245 GO:0009055
Lele15g1411 242 PANTHER BLUE COPPER PROTEIN 99 206 IPR039391 GO:0009055
Lele15g1411 242 FunFam Lamin-like protein 97 200 - -
Lele15g1411 242 Pfam Plastocyanin-like domain 109 191 IPR003245 GO:0009055
Lele15g1411 242 SUPERFAMILY Cupredoxins 98 198 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1411 Lele-ChrLele15 8212308 8214115 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1411 93 242 Phytocyanin Superfamily AT5G15350 51.974 8.92e-56 174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g1056 13 21514056 21515883 Lele15g1411 15 8212308 8214115 hybridization
Lele14g0957 14 19923469 19928779 Lele15g1411 15 8212308 8214115 hybridization