Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1410 ATGGTGGCGGCGATGGCGGTGATGTTTCTGATAATGGTGGTGACGGGAGATCCGGTGCTGCACAAGGTGGGTGGATCCAAAGGTTGGATTAATCAAGCCGTTAACTATACTGTATGGTCTGCTCACGAGCAATTCTTTCCCGGTGATTGGCTCCTATTCAGCTTTGACAAGCGATACTTCAACGTTCTGGAGGTGAATGAGACCAGCTACGAGAATTGCAGAGACGATGGGTTCGTGAAGAACTTGACGCGTGGTGGTAGAGACGTGGTGCAATTGACAGAGGCAAGGACTTACTACTACCTCACTAGTGGAGGCTATTGCTTTCAAGGTATGAAAGTCGCCGTCACCGTCCAACGTGACCACCGTGAAGCAGCTCCTGCTCCGTCTCCCTCTCCCTCTTCGGCACCTTCTACTTTCTCTGTGTTCAATGCGCTTCATTGCCTCGCGCCTTTCGTGGCGTTTTGGGGAATTATTAATATATGA 483 0.5052 MVAAMAVMFLIMVVTGDPVLHKVGGSKGWINQAVNYTVWSAHEQFFPGDWLLFSFDKRYFNVLEVNETSYENCRDDGFVKNLTRGGRDVVQLTEARTYYYLTSGGYCFQGMKVAVTVQRDHREAAPAPSPSPSSAPSTFSVFNALHCLAPFVAFWGIINI 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1410 160 SUPERFAMILY Cupredoxins 20 118 IPR008972 -
Lele15g1410 160 Gene3D - 19 122 IPR008972 -
Lele15g1410 160 Pfam Plastocyanin-like domain 29 111 IPR003245 GO:0009055
Lele15g1410 160 PANTHER BLUE COPPER PROTEIN 20 126 IPR039391 GO:0009055
Lele15g1410 160 ProSiteProfiles Phytocyanin domain profile. 19 119 IPR003245 GO:0009055
Lele15g1410 160 FunFam Lamin-like protein 17 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1410 Lele-ChrLele15 8206213 8209030 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1410 5 140 Phytocyanin Superfamily AT2G27035 44.853 8.74e-40 130
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g1057 13 21518223 21519885 Lele15g1410 15 8206213 8209030 hybridization