Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1409 ATGGCCGCAAAGAACGGCGGATCCGCCACTGCGCCACCGCCACGCCCGACGATCACTCTCCCCCCTCGGCCTTCCATGGAGGTCTTCTTCTCCGGTGGCCCTGGCGCAAGCCCCGGCCCGATGACCCTCGTATCCAGTTTCTTCTCCGATAATTACCCTGACTCAGACTGTCGGTCCTTTTCTCAGTTGCTCGCCGGAGCTATGGCTTCTCCGCTTGCTCTCAGTGCGAGGCCTGGCTTCTTTCCGGAAAATTCGACCGACAATTCCTCCAAAGAAGCTACTGCTGAGGATGGGGCCCAGAAGAATTCGGGTTTCAAGCAGAGTAGACCCATGAATCTGGTTATTGCTCGTTCACCAATGTTTACAGTTCCACCTGGATTAAGCCCTTCTGGGTTGCTTAATTCACCGGGCTTCTTTCCGCCACAGAGCCCCTTTGGGATGTCCCATCAGCAGGCTTTGGCTCAGGTTCAAGCTCAAGCTGTCCTGGCACAATCTCATATGCACATGCAAGGTGATCATCAACAATCTGCTGTAACAGCTCCTGGTGAACCATTGATGCAGCAGCCATCTTTTGTTCCAAGTGAAGCTTCAGACCAGCAAGTGGCACCATCTGCATCAGATTCTAGAAGTGCTCAAATGGAGACTTCAGATATTTCTCACACTGATAAGAAGTATCAACCTTCTTCCTTAGCCATTGATAAACCTGCAGATGATGGCTACAATTGGCGTAAGTATGGGCAGAAGCAGGTTAAAGGGAGTGAGTACCCACGGAGCTACTACAAGTGTACACATCTGAATTGCCCAGTAAAGAAAAAGGTTGAGCGTGCTCCTGATGGCCACATAACTGAAATTATCTATAAAGGCCAGCATAATCATGAACTGCCTCAGCCAAGCAAGCGTATCAAAGATAATTCCGATTTAAATGGAAATACAAGTGTTCAAGTTCAGTCTGACTCGACTAGACAACGCTGGGTAGGAAATTTAACCAAGTTTGGTGAAAGCATGTCTGATCATTCAGTGCCAGAAAGTGATCCCTCATCCAATCAAGGTGCTCACAGGCAACCACCTGGATCAAGTGAGAGTGAGGAAGGGGGTGATGCTGATACAAGGGAAGAGGAGGGAGATGTCAGTGAGCCAAATCCCAAGAGAAGGAACACTGATCTTGTGGCTTCTGAAGTACCTTTGTCTCACAAGACTGTCACAGAACCCAAAATCATTGTGCAAACAAGAAGCGAAGTTGATCTTCTGGATGATGGCTACAGATGGCGCAAGTATGGGCAAAAAGTGGTAAAAGGAAATCCCTATCCAAGGAGTTATTACAAATGCACCAGTGCAGGATGCAATGTGCGTAAGCATGTTGAGAGGGCTTCAACAGACCCCAAAGCTGTCATAACTACCTATGAGGGAAAACATAACCATGATGTTCCTGCTGCTAAAACCAGCAGCCACAACACAGCTAATAGCAATTCAATGCCAGTAAAACCACAGAGAGTGGTGCCTGAGAAGCATCCTCTGCTTAGGGATATGGATTTTGGAAATAACAACCAAAGACCGGTCGCATTACGCTTGAAAGAAGAGCAAATCATAGTATAG 1593 0.4796 MAAKNGGSATAPPPRPTITLPPRPSMEVFFSGGPGASPGPMTLVSSFFSDNYPDSDCRSFSQLLAGAMASPLALSARPGFFPENSTDNSSKEATAEDGAQKNSGFKQSRPMNLVIARSPMFTVPPGLSPSGLLNSPGFFPPQSPFGMSHQQALAQVQAQAVLAQSHMHMQGDHQQSAVTAPGEPLMQQPSFVPSEASDQQVAPSASDSRSAQMETSDISHTDKKYQPSSLAIDKPADDGYNWRKYGQKQVKGSEYPRSYYKCTHLNCPVKKKVERAPDGHITEIIYKGQHNHELPQPSKRIKDNSDLNGNTSVQVQSDSTRQRWVGNLTKFGESMSDHSVPESDPSSNQGAHRQPPGSSESEEGGDADTREEEGDVSEPNPKRRNTDLVASEVPLSHKTVTEPKIIVQTRSEVDLLDDGYRWRKYGQKVVKGNPYPRSYYKCTSAGCNVRKHVERASTDPKAVITTYEGKHNHDVPAAKTSSHNTANSNSMPVKPQRVVPEKHPLLRDMDFGNNNQRPVALRLKEEQIIV 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1409 530 MobiDBLite consensus disorder prediction 478 494 - -
Lele15g1409 530 Pfam WRKY DNA -binding domain 417 473 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele15g1409 530 Pfam WRKY DNA -binding domain 237 293 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele15g1409 530 MobiDBLite consensus disorder prediction 286 300 - -
Lele15g1409 530 MobiDBLite consensus disorder prediction 286 396 - -
Lele15g1409 530 MobiDBLite consensus disorder prediction 164 241 - -
Lele15g1409 530 MobiDBLite consensus disorder prediction 301 356 - -
Lele15g1409 530 SUPERFAMILY WRKY DNA-binding domain 235 295 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele15g1409 530 MobiDBLite consensus disorder prediction 81 108 - -
Lele15g1409 530 ProSiteProfiles WRKY domain profile. 231 295 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele15g1409 530 ProSiteProfiles WRKY domain profile. 411 476 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele15g1409 530 FunFam WRKY transcription factor 33 403 469 - -
Lele15g1409 530 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 135 490 IPR044810 GO:0003700
Lele15g1409 530 MobiDBLite consensus disorder prediction 164 183 - -
Lele15g1409 530 SMART WRKY_cls 236 294 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele15g1409 530 SMART WRKY_cls 416 475 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele15g1409 530 MobiDBLite consensus disorder prediction 473 496 - -
Lele15g1409 530 Gene3D WRKY domain 401 477 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele15g1409 530 Gene3D WRKY domain 224 296 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele15g1409 530 MobiDBLite consensus disorder prediction 190 215 - -
Lele15g1409 530 MobiDBLite consensus disorder prediction 79 108 - -
Lele15g1409 530 FunFam WRKY transcription factor 224 296 - -
Lele15g1409 530 MobiDBLite consensus disorder prediction 1 34 - -
Lele15g1409 530 SUPERFAMILY WRKY DNA-binding domain 408 476 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1409 Lele-ChrLele15 8187777 8191148 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1409 15 528 WRKY Transcription Factor Family AT2G03340 54.135 9.91e-158 457
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele15g1409 WRKY 1.3e-25 CL0274