Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1407 ATGCGAGCGAAAGCATCGAAGGAGAACATCAAGGAGGGACATCATCTCTGGGTCGTAACAGGACAGTTGCTTCGAATTCGATTCTTCATCCCAAATCCTACAAGTTTTCTTCTCTCTGTCTACGGTTTAATCGGAGATCTGAAAATGGATGGGTCAACTGGTCGTGGTGGTACTGGTGTGGACATGTATCTACCAAATTATAAATTGGGGAAAACACTTGGTATTGGATCCTTTGGCAAGGTGAAAATTGCTGAGCATGTTTTGACAGGTCACAAAGTTGCCATTAAGATCCTCAACAAACGTAAGATAAAGAACATGGAAATGGAAGAAAAAGTGAGAAGAGAAATCAAAATCTTAAGATTGTTCATGCATCCTCACATCATACGACTTTATGAAGTCATAGAAACCGCGGCAGACATATATGTTGTAATGGAGTACGTAAAATCTGGAGAGCTCTTTGACTACATAGTAGAAAAGGGTAGGTTGCAAGAAGATGAAGCTCGTAATTTTTTTCAGCAGATAATCTCTGGTGTTGAGTACTGTCACAGGAATATGGTGGCTCATAGAGACTTGAAGCCTGAGAATTTGCTGTTGGACTCCAAATGCAATGTCAAGATTGCAGATTTTGGTCTGAGCAACGTCATGGTTGATGGTCATTTCCTTAAGACAAGTTGTGGGAGCCCAAACTATGCTGCTCCTGAGGTAATCTCTGGAAAATATTATGCTGGGCCTGAAGTAGATGTATGGAGCTGTGGTGTAATTTTATACGCTCTTCTCTGTGGTACTCTTCCTTTTGATGATGAAAACATTCCAAACCTTTTCAAGAAAATAAAGGGTGGAATATACACTATTCCTAGTCATCTGTCACTTGGTGCTAGAGATCTGATACCGAGGATGCTTGTGGTTGATCCTATGAAAAGGGTGACCATACCTGAGATCCGTCAACACCCATGGTTCCAAGCTCATCTCCCTCGATATTTGGCGGTGCCACCACCCGATACTTCACAACAAGCTAAAAAGATTGATGAGGAAATTCTTCAGGAAGTGGTTAATATGGGATTTGATAGGAATCAGTTGGTTGAATCTCTTCGCAACAGGATACAGAATGAGGGTACTGTGGCATACTATTTGCTACTGGACAATCGATTCCGTGTTTCGAGCGGCTATCTTGGTGATGAGTTTCAAGAGAGTATGGATACTGGTTATAATCGTATCCATCCTAGTGATGTCGCTGCTCCAGCTGTTGGGAACCGCTTTCCAGGGTATATGGATTATCAAGGAGCTGGATTGAGGCCACAGTTCCCTGCTGAGAGAAAATGGGCCCTTGGGCTCCAGTCTCGAGCCCATCCTCGTGCAATAATGAATGAGGTCCTTAAAGCTCTGCAAGAATTGAATGTGTGTTGGAAGAAGATTGGACACTATAACATGAAGTGCCGGTGGGTTGCCGGCCTTCTGGGTCATCCTGAAGGAATAGTTAACAACCATAATCATTACTTTGGAGATGACTCTGCTATTATTGAGAATGATGCTGTTTCTAAGTCAAATGTAGTCAAGTTTGAAATGCAGCTTTACAAAACCCGTGAAGAGAAGTATCTGCTTGATCTTCAAAGGGTCCAGGGCCCCCAGTTTCTCTTCTTGGATCTCTGTGCCTCTTTCCTTGCGCAGCTACGTGTCCTCTAG 1680 0.4304 MRAKASKENIKEGHHLWVVTGQLLRIRFFIPNPTSFLLSVYGLIGDLKMDGSTGRGGTGVDMYLPNYKLGKTLGIGSFGKVKIAEHVLTGHKVAIKILNKRKIKNMEMEEKVRREIKILRLFMHPHIIRLYEVIETAADIYVVMEYVKSGELFDYIVEKGRLQEDEARNFFQQIISGVEYCHRNMVAHRDLKPENLLLDSKCNVKIADFGLSNVMVDGHFLKTSCGSPNYAAPEVISGKYYAGPEVDVWSCGVILYALLCGTLPFDDENIPNLFKKIKGGIYTIPSHLSLGARDLIPRMLVVDPMKRVTIPEIRQHPWFQAHLPRYLAVPPPDTSQQAKKIDEEILQEVVNMGFDRNQLVESLRNRIQNEGTVAYYLLLDNRFRVSSGYLGDEFQESMDTGYNRIHPSDVAAPAVGNRFPGYMDYQGAGLRPQFPAERKWALGLQSRAHPRAIMNEVLKALQELNVCWKKIGHYNMKCRWVAGLLGHPEGIVNNHNHYFGDDSAIIENDAVSKSNVVKFEMQLYKTREEKYLLDLQRVQGPQFLFLDLCASFLAQLRVL 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1407 559 SMART serkin_6 67 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele15g1407 559 Gene3D Kinase associated domain 1, KA1 443 557 - -
Lele15g1407 559 CDD AMPKA_C 437 556 - -
Lele15g1407 559 Gene3D Transferase(Phosphotransferase) domain 1 59 397 - -
Lele15g1407 559 Pfam Kinase associated domain 1 516 558 IPR001772 -
Lele15g1407 559 Pfam UBA/TS-N domain 341 377 IPR015940 -
Lele15g1407 559 ProSitePatterns Serine/Threonine protein kinases active-site signature. 186 198 IPR008271 GO:0004672|GO:0006468
Lele15g1407 559 ProSiteProfiles Kinase associated domain 1 (KA1) profile. 510 558 IPR001772 -
Lele15g1407 559 SUPERFAMILY KA1-like 376 558 IPR028375 -
Lele15g1407 559 SMART uba_6 342 379 IPR015940 -
Lele15g1407 559 FunFam Non-specific serine/threonine protein kinase 57 148 - -
Lele15g1407 559 SUPERFAMILY Protein kinase-like (PK-like) 64 335 IPR011009 -
Lele15g1407 559 ProSitePatterns Protein kinases ATP-binding region signature. 73 96 IPR017441 GO:0005524
Lele15g1407 559 Pfam Protein kinase domain 67 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele15g1407 559 PANTHER SERINE/THREONINE KINASE 66 384 - -
Lele15g1407 559 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 340 380 IPR015940 -
Lele15g1407 559 FunFam Non-specific serine/threonine protein kinase 443 557 - -
Lele15g1407 559 CDD STKc_AMPK_alpha 64 319 - -
Lele15g1407 559 CDD UBA_SnRK1_plant 341 381 - -
Lele15g1407 559 FunFam Non-specific serine/threonine protein kinase 58 397 - -
Lele15g1407 559 ProSiteProfiles Protein kinase domain profile. 67 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele15g1407 559 SUPERFAMILY UBA-like 329 378 IPR009060 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1407 Lele-ChrLele15 8170698 8177615 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1407 67 319 CBL-interacting serine-threonine protein kinases AT4G24400 52.362 1.11e-92 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_AMPK Lele15g1407 Pkinase 6.3e-80 CL0016