Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1403 ATGGCAGCTCGTGTAATCACGGTTTCACAGACCGGAAGCGGAGAGTATCGGACGGTGCAGGAAGCAATTGATTCCATTCCCTTGGGAAACAACCGTCGGACGGTGATTCGAGTGTCTCCGGGAATCTACAAGCAGCCAGTGTACGTACCCAAGACTAAGAATTTCATCACCCTTGCTGGTCTGTGTCCGGAGGATACTGTGCTTACCTGGAATAATACCGCTGCCAGAATCGAACACCACCAGGCTGCTCGGGTAATAGGCACTGGTACTTTTGGCTGTGGTAGTATCATTGTGGAGGGAGAGGATTTTATTGCCGAGAACATCACGTTCGAGAATTCCTCTCCTCAGGGTTCAGGGCAAGCGGTGGCAATTAGAGTGACAGCAGATCGATGTGCCTTCTATAACTGCAGGTTCCTGGGATGGCAGGACACTCTGTACTTACACTATGGCAAACAGTACTTGAAGGATTGTTATATTGAAGGAAGCGTGGACTTTATTTTTGGCAATAGCACTGCTCTTTTGGAACATTGCCATATTCACTGCAAGTCTGAAGGTTTCATTACTGCACAGAGTAGAAAATCTTCTCATGAAACAACTGGTTATGTATTCCTAAGATGTGTCATAACGGGTAATGGAGATACTTCATACGCATATCTTGGACGACCATGGGGACCTTTTGGACGAGTGATCTTTGCATACACTTATATGGATCGATGTATAAGGCCTCATGGCTGGAATAATTGGGGTAAATTCGAGAATGAGAGAACTTGTTGCTTTTATGAATACAGGTGTCATGGACATGGTTGCTGTCCATCCAAACGAGTGGCATGGGCGAGAGAATTGATAGATGAAGAAGCAGAGCAGTTCCTTTCACATCGTTTCATTGACCCAGATGCTAATAGACCTTGGCTTGCCCAAAGAATGGCTTTGAGGATTCCATATTCTGCTTAG 951 0.4585 MAARVITVSQTGSGEYRTVQEAIDSIPLGNNRRTVIRVSPGIYKQPVYVPKTKNFITLAGLCPEDTVLTWNNTAARIEHHQAARVIGTGTFGCGSIIVEGEDFIAENITFENSSPQGSGQAVAIRVTADRCAFYNCRFLGWQDTLYLHYGKQYLKDCYIEGSVDFIFGNSTALLEHCHIHCKSEGFITAQSRKSSHETTGYVFLRCVITGNGDTSYAYLGRPWGPFGRVIFAYTYMDRCIRPHGWNNWGKFENERTCCFYEYRCHGHGCCPSKRVAWARELIDEEAEQFLSHRFIDPDANRPWLAQRMALRIPYSA 316
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1403 316 SUPERFAMILY Pectin lyase-like 2 303 IPR011050 -
Lele15g1403 316 Pfam Pectinesterase 6 296 IPR000070 GO:0030599|GO:0042545
Lele15g1403 316 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 3 303 - -
Lele15g1403 316 ProSitePatterns Pectinesterase signature 2. 159 168 IPR033131 -
Lele15g1403 316 FunFam Pectinesterase 2 309 - -
Lele15g1403 316 Gene3D - 1 310 IPR012334 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele15g1403 Lele-ChrLele15 8154941 8157990 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1403 4 309 Carbohydrate Esterase AT5G47500 38.608 2.68e-70 221