Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1382 ATGCCTAGAATTAGGGAAAACGAGAAACAAGCCACTGCAAACTATTCCTACCATCAACGGGAAACTCTCCATGACCTGGTCCATCTCCTTCTCGTGCCCTGGAAACAAACAATCCGTAACCCTGTGATCCGAGAAAGCGATCGCCACGAACACGATCACCGACATTATCGCATGCACAAAGTCCGTCAACCCCACTTTATACCTCTCGTCCTTGGGCACTTCCACATTAAGGCCCGGCTTGAAGACGGACAACCCTTTTGGGGTTACGAAGCCGTAGTAAACGGTGCCTTCGGGGCCGCGAAAGCTGTCGGTGAAGTGGAAGAAGAAGCAGGAGAGGGCGCAGAGGTCGAGGAGGAGGTGGATCATCAGGGAGTGGACGTCGGAGCAGTGGCCAGATTTGGTGATAGTGGGAAGCACCATCTCGAAGGTAAGGAGGGTGCCGGTTGGGAGGAAGTTAACGAGCATGGAGGTCTTGGAGAGGGTCTTCTGGACGCCCTTTGCAACGGCACGTCGCCTTCACAATCACAAATCACAATGTCTTCAGAACCCAGCTCGTCGGAATCATCGTCTTTCCCAACCGCCGACGAATTGGACGACTTCCAAATTCGAAGGCTCACTCTGCTTCTTCCTTTCGTTTTCAGGCTAGCTGCTCGCCAACGTAACCGTCACCACCATGACGACGATTCCGTCCTCGATCTTCCCTTGCGGGTCATCCTCTTTAACCCTGCCACCAGAACCACCGTCATGATCGACCGCTCCCTCAACTTGGACTCGCTACTCCAGGAGGTGCCCACGACGAAGCCCGGGTTGTTGCCCGCGTCCAAGGATTCCATGGCGGCCATGCCCACCGTCATGGTCACCGAAGAAGGTTCTGGGTGTGCGATTTGCTTGGAAGATTACATGATTGGGGACGAGGCTAGGGAGATGCCCTGCAAGCATAGGTTTCACCCTCGCTGCATCGAGAAGTGGCTCGGGATTCATGGTGTGTGTCCTGTTTGCCGATTCCCGATGCCCGTGGACGCTCGTGACGTCGAGCTTGACGATAGCGAAACGGCGGAGAGCGATGGTGACCTCATGCAGGCGGGTTCCGACCCTTCCCGGAGCTCCGCGCATTCTGATCCTGCTTCTGATTCACAAGACGAGAGTTCTACAGTGGATGAATCTTCGACGAGTACAGAGTCTGTAAGCGTGGAATAA 1197 0.5497 MPRIRENEKQATANYSYHQRETLHDLVHLLLVPWKQTIRNPVIRESDRHEHDHRHYRMHKVRQPHFIPLVLGHFHIKARLEDGQPFWGYEAVVNGAFGAAKAVGEVEEEAGEGAEVEEEVDHQGVDVGAVARFGDSGKHHLEGKEGAGWEEVNEHGGLGEGLLDALCNGTSPSQSQITMSSEPSSSESSSFPTADELDDFQIRRLTLLLPFVFRLAARQRNRHHHDDDSVLDLPLRVILFNPATRTTVMIDRSLNLDSLLQEVPTTKPGLLPASKDSMAAMPTVMVTEEGSGCAICLEDYMIGDEAREMPCKHRFHPRCIEKWLGIHGVCPVCRFPMPVDARDVELDDSETAESDGDLMQAGSDPSRSSAHSDPASDSQDESSTVDESSTSTESVSVE 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1382 398 SUPERFAMILY RING/U-box 288 340 - -
Lele15g1382 398 ProSiteProfiles Zinc finger RING-type profile. 293 334 IPR001841 -
Lele15g1382 398 MobiDBLite consensus disorder prediction 167 193 - -
Lele15g1382 398 CDD RING-H2_PA-TM-RING 293 334 - -
Lele15g1382 398 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 175 338 - -
Lele15g1382 398 MobiDBLite consensus disorder prediction 346 398 - -
Lele15g1382 398 Pfam Ring finger domain 293 334 IPR001841 -
Lele15g1382 398 MobiDBLite consensus disorder prediction 161 193 - -
Lele15g1382 398 MobiDBLite consensus disorder prediction 361 398 - -
Lele15g1382 398 FunFam E3 ubiquitin-protein ligase RNF181 261 340 - -
Lele15g1382 398 SMART ring_2 293 333 IPR001841 -
Lele15g1382 398 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 265 340 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1382 Lele-ChrLele15 8038882 8041017 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1382 203 344 C3H Transcription Factor Family AT1G26800 42.657 9.54e-34 123