Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1379 ATGCAGGCGACAAGTCAAAATATGTGGAGCTTGAATCCTGAAGGAGAGCAGCCGCACAACCCAAGCACCCATAAACCACCTGTTCCTCTTCCATTTGCAAAACTTGCAGAGAATTACCCTCCTGGTTTTCTCAGGAAGGTATTGGCAGAGATAATAGGAACATATCTGTTGGTGTTTGTGGGAAGTGGGACGGCTGCTCTGAATGCTTATGATGAGCAGAAAATATCAAAACTAGGAGCTTCACTTGCAGGAGGATTCATTGTGATTGTGATGATTTATGCTATCGGACACATCTCTGGTGCTCACATGAACCCAGCAGTGTCCTTTGCTTTTGCCGCTGTCGGGCATTTTCCATGGAAACAGGTCCCATTATACGTGGCAGCCCAATTGACAGGAGCCATTTCTGCCTCTTTTACTTTGCGGCTGATATTGGACCCAATAAGACAGCTTGGGACAACCTCACCTTCTGGAAGTGATGTTCAAGCTCTCATCATGGAGATGGTGGCAACGTTCACTATGATGTTCATTGCCTCCGCCGTGTCAACTGATGCAAAAGCCGTTGGAGAGCTCGCAGGAGTTGCAGTAGGCTCTTCAGTAATCATAGCAGGCATCCTTGCAGGACCTATATCAGGGGGATCAATGAACCCAGCAAGAACACTTGGTCCTGCAATAGCAAGTGGATCCTATAAAGGACTTTGGGTCTATGTGGTTGGACCAGTTACCGGGGCACTTTTGGGAGCAGGGTCTTACATTACTATTAAAGAGACAGATGACTCAGCTTCGTCCACTTCATTGCTATCATTTCCACTTGAGCTTAGCTCAAAGAATAGGGAAACCGAGCAAGTTTAA 849 0.4676 MQATSQNMWSLNPEGEQPHNPSTHKPPVPLPFAKLAENYPPGFLRKVLAEIIGTYLLVFVGSGTAALNAYDEQKISKLGASLAGGFIVIVMIYAIGHISGAHMNPAVSFAFAAVGHFPWKQVPLYVAAQLTGAISASFTLRLILDPIRQLGTTSPSGSDVQALIMEMVATFTMMFIASAVSTDAKAVGELAGVAVGSSVIIAGILAGPISGGSMNPARTLGPAIASGSYKGLWVYVVGPVTGALLGAGSYITIKETDDSASSTSLLSFPLELSSKNRETEQV 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1379 282 MobiDBLite consensus disorder prediction 1 19 - -
Lele15g1379 282 ProSitePatterns MIP family signature. 102 110 IPR022357 -
Lele15g1379 282 Pfam Major intrinsic protein 43 249 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele15g1379 282 SUPERFAMILY Aquaporin-like 38 255 IPR023271 -
Lele15g1379 282 Gene3D Glycerol uptake facilitator protein. 27 263 IPR023271 -
Lele15g1379 282 PANTHER AQUAPORIN NIP2-1 25 259 IPR034294 -
Lele15g1379 282 MobiDBLite consensus disorder prediction 1 27 - -
Lele15g1379 282 CDD MIP 45 250 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele15g1379 282 PRINTS Major intrinsic protein family signature 45 64 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele15g1379 282 PRINTS Major intrinsic protein family signature 121 140 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele15g1379 282 PRINTS Major intrinsic protein family signature 165 183 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele15g1379 282 PRINTS Major intrinsic protein family signature 233 253 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele15g1379 282 PRINTS Major intrinsic protein family signature 84 108 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele15g1379 282 PRINTS Major intrinsic protein family signature 196 218 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1379 Lele-ChrLele15 8017235 8019628 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1379 45 258 Major Intrinsic Protein MIP AT5G37820 51.389 2.54e-71 221