Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1371 ATGTTCACGTTTTTAGGTCAAGAGCTATGGACAATTCTTATTGGCACCGTATCATTGCACCCCACAAAACTGCCTTTTACTATCAAGTTAGGGGCCACTGTACGTTTTCGGGGCAGGGCTGGAACAGAGGGAAGTGGCCAGATGAGGAAACGTCAAGTTGTGGTGAGAAGGGAGGAGCCTGCTCGGTGCTCAAGCTCTTCTTCTTTTACTGTTAGGAGTGTGAAATATGGAGAGTGCCAAAAGAATCATGCGGCTAACGTCGGAGGATACGCCGTGGATGGTTGCCGCGAATTCATGGCGAGTGGAGATGAAGGCACAGCCGCTGCTCTGACCTGTGCCGCCTGTGGTTGCCACAGGAACTTTCACAAAAGAGAGGTGGAGACTGAAGTAGTGTGTGATGAGTGCTCTTCACCTACCTCCAACGGGACTTGA 432 0.5093 MFTFLGQELWTILIGTVSLHPTKLPFTIKLGATVRFRGRAGTEGSGQMRKRQVVVRREEPARCSSSSSFTVRSVKYGECQKNHAANVGGYAVDGCREFMASGDEGTAAALTCAACGCHRNFHKREVETEVVCDECSSPTSNGT 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1371 143 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 76 125 IPR006456 -
Lele15g1371 143 Pfam ZF-HD protein dimerisation region 74 126 IPR006456 -
Lele15g1371 143 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 75 126 IPR006456 -
Lele15g1371 143 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 49 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1371 Lele-ChrLele15 7966050 7967135 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1371 48 143 Zinc finger-homeobox gene family AT3G28917 73.267 2.87e-42 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Lele15g1371 ZF-HD_dimer 5.6e-30 No_clan