Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1354 ATGTCTGGTCCTCGTGGTCTGCACACTGGAGAGAGGAGAACAATTCCCATTTGCCTTGAGGAAGATTGCCGTGTTCAAGAGAATGATGAAATCAAGTCTGCTAAAGAAGAGATGGGTGTGGTGAAAGAAGAAAATGAAGAAAGGTTGAAGATGATGCTGAACCGAGTGGAAAAGGATTACCAATCCCTCCAACTGCGTTTCTTTGATATCTTGCGCAGAGAAGCTTCTGAAAAAGGCATAACAGATTCAGCCAATTCCCATGAGGAAACTGAAGAGCCTGAGCTCGTGTCACTTTGCCTGGGAAGAAGTCCAAGTGACCCTAAAAAAGATACAAGAAACACTGCTAAACCTAAAGAAAGTGAAGATCTGGAGGCTTGCCTTACCCTTGGATTAGACTCCAATTGTGAGTTATCAATGGAGATGGTGTCTGATCAGAGCCCAGGAAACAGCTCAGCAGAAACTAAGGAACCAGAAATAGGGGGAACATGGCAATCAAATAAATCTGTCAAGGCCAAAAATGGAGAAGATGAAATTTCAGAGCAGATACCTGCTAAGAAAGCGAGGGTTTCCGTGAGAGCAAGATGTGACACCCCTACGATGAGTGATGGATGCCAGTGGAGAAAATATGGACAGAAGATAGCCAAAGGGAATCCTTGTCCACGTGCATACTATCGCTGCACGGTTGCACCAGCATGTCCGGTCAGAAAACAGGTGCAAAGATGTGCTGAGGACATGTCCATCTTAATCACTACATATGAAGGGACCCACAACCACCCACTTCCAGTTTCAGCCACAGCCATGGCTTCCACCACTTCAGCTGCAGCTTCCATGCTATTGTCAGGTTCTTCAACATCTCAGCCTGCACATAACAGTTTTGCATCATTTACAAATGCTCCTACACTGCTTAATAATGCCCCAGACCTTGGACATTTTGATCTATCCAAAGCAAAACAGGTCTTCTTGTCCAACCCTGCCCCACCTATGTTCCCAACAATCACTCTAGACTTAACTTCTGCTTCATCCTCATCAACCTATGTCAATAATCGTCCCCCTTCAAACTTTGCTTTAAACCCAAGATTTCCTGCAACAAGTCTAAGTTTTTGCTCCAAGGAGCCCAACATTCAACAAGCAGTACGGGGTAATGGAATCCTTAATAATGAGAGAACCCACATGAGGTCAGTTGATCTGGGAAATCAATTTCAAGGACAGTTCCATCCAAACTGCATGCAAAACCAAGCTCATTCACGAGAGGCTTTAGCAGAGACCTTAACCAAAGCAATCAGTACGGATCCAAGACTTCAATCAGTGATAGCTGAAGCAGTTTCATCTATAGTGGGTCAAGGATCCGCCAATGTGAATCAGCCAGGGGGAAGGGAAATTTCAGAGTTAGGGTTGAACTTGAAACTAGGACAACATTCTCAGTTTGCTTCTTCCAATCCGTTGACCCAAAATGGGAAAGGATGCTTACCAGGCTATTTCAACAGATTGTCGTCAAATTCCTTTACTGGAAACTTCATGCCTCTCCAACCTCCAGTTCCGTTTTCTGTATCTAAGAGAAGCGTGCCTCCTTCCGTTAGCGATCAGATCAATCGTTAA 1596 0.4461 MSGPRGLHTGERRTIPICLEEDCRVQENDEIKSAKEEMGVVKEENEERLKMMLNRVEKDYQSLQLRFFDILRREASEKGITDSANSHEETEEPELVSLCLGRSPSDPKKDTRNTAKPKESEDLEACLTLGLDSNCELSMEMVSDQSPGNSSAETKEPEIGGTWQSNKSVKAKNGEDEISEQIPAKKARVSVRARCDTPTMSDGCQWRKYGQKIAKGNPCPRAYYRCTVAPACPVRKQVQRCAEDMSILITTYEGTHNHPLPVSATAMASTTSAAASMLLSGSSTSQPAHNSFASFTNAPTLLNNAPDLGHFDLSKAKQVFLSNPAPPMFPTITLDLTSASSSSTYVNNRPPSNFALNPRFPATSLSFCSKEPNIQQAVRGNGILNNERTHMRSVDLGNQFQGQFHPNCMQNQAHSREALAETLTKAISTDPRLQSVIAEAVSSIVGQGSANVNQPGGREISELGLNLKLGQHSQFASSNPLTQNGKGCLPGYFNRLSSNSFTGNFMPLQPPVPFSVSKRSVPPSVSDQINR 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1354 531 Gene3D WRKY domain 184 262 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele15g1354 531 Coils Coil 46 66 - -
Lele15g1354 531 MobiDBLite consensus disorder prediction 79 95 - -
Lele15g1354 531 Pfam WRKY DNA -binding domain 202 259 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele15g1354 531 SMART WRKY_cls 200 260 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele15g1354 531 SUPERFAMILY WRKY DNA-binding domain 193 261 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele15g1354 531 MobiDBLite consensus disorder prediction 141 180 - -
Lele15g1354 531 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 27 452 IPR044810 GO:0003700
Lele15g1354 531 MobiDBLite consensus disorder prediction 79 123 - -
Lele15g1354 531 Coils Coil 24 44 - -
Lele15g1354 531 FunFam probable WRKY transcription factor 31 185 262 - -
Lele15g1354 531 MobiDBLite consensus disorder prediction 105 123 - -
Lele15g1354 531 MobiDBLite consensus disorder prediction 141 169 - -
Lele15g1354 531 ProSiteProfiles WRKY domain profile. 195 261 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1354 Lele-ChrLele15 7859090 7861483 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1354 38 496 WRKY Transcription Factor Family AT5G15130 43.089 1.00e-83 267
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele15g1354 WRKY 5.3e-24 CL0274